HHsearch alignment for GI: 254780615 and conserved domain: PRK08116

Probab=94.78  E-value=0.13  Score=29.43  Aligned_cols=63  Identities=24%  Similarity=0.367  Sum_probs=39.0

Q ss_pred             CCCCCCCCCCCCCCCCCC-CCEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHH
Q ss_conf             000231100235570215-41003675666624899999998850578852687621643459999998542
Q gi|254780615|r  132 ILTTGIKVIDLISPYQKG-GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMID  202 (478)
Q Consensus       132 ~L~TGIkaID~l~pig~G-qr~gIfgg~GvGKT~l~~~~i~n~~~~~~~v~V~~~iGER~rEv~e~~~e~~~  202 (478)
T Consensus        90 a~~~a~~Y~~~f~~~~~~~~GLll~G~~GtGKThLa~aIa~~l~~-~g~~V~~~~~-------~~ll~~lk~  153 (262)
T PRK08116         90 AYKVAVKYVKKFEEMKKESVGLLLWGSPGNGKTYLAAAIANELIE-KGVPVVFVNV-------PELLNRIKS  153 (262)
T ss_pred             HHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHH-CCCEEEEEEH-------HHHHHHHHH
T ss_conf             999999999989873646861899898999899999999999998-7993999889-------999999999