HHsearch alignment for GI: 254780615 and conserved domain: PRK08149

>PRK08149 ATP synthase SpaL; Validated.
Probab=100.00  E-value=0  Score=947.06  Aligned_cols=418  Identities=27%  Similarity=0.420  Sum_probs=391.1

Q ss_pred             CCCCEEEEEEECCEEEEEECCCCCCCCCEEEECCCCCEE--EEEEEEEECCCEEEEEECCCCCCCCCCCEEEECCCEEEE
Q ss_conf             534138999955789998166652314189981699559--999998708987999981487888788888977984898
Q gi|254780615|r    7 TESVGRIQQIMGAVVDVVFVNSLPPIFSSLETSDKGSRI--VFEVVQHLGEKTVRCIAMSRTDGLSRGDCVIDTGTQITV   84 (478)
Q Consensus         7 ~~~~GrV~~V~G~vvev~g~~~~~~i~~~i~~~~~g~~i--~~EVV~~l~e~~V~~i~l~~t~GI~~G~~V~~tg~~l~V   84 (478)
T Consensus         4 ~~~~g~v~rI~G~lIe~~~p~~~iGelc~I~~~~~~~~~~~~aEVvgf-~~~~~~l~~~~~t~Gi~~g~~V~~tg~~~~V   82 (427)
T PRK08149          4 LQRLAHPQRIQGPIIEAELPDVAIGELCEIRAGWHSKEVIARAQVVGF-QRERTILSLIGNAQGLSRQVVLYPTGRALSI   82 (427)
T ss_pred             CCCCCEEEEEEEEEEEEEECCCCCCCEEEEEECCCCCCEEEEEEEEEE-CCCEEEEEECCCCCCCCCCCEEEECCCCCEE
T ss_conf             110675899995699999789997887899806898614678889731-4977999978798888999999978995188


Q ss_pred             ECCHHHHHHHHHHHHHHCCCCCCC---CCHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCC
Q ss_conf             859237655887875230167875---30011002345444100001342000231100235570215410036756666
Q gi|254780615|r   85 PVGEATLGRIMNVIGEPVDDQGAI---ISSEKRAIHQPSPSYTEQSTDASILTTGIKVIDLISPYQKGGKIGLFGGAGVG  161 (478)
Q Consensus        85 pVG~~lLGRViD~lG~PLDg~g~i---~~~~~~pi~~~~p~~~~R~~i~e~L~TGIkaID~l~pig~Gqr~gIfgg~GvG  161 (478)
T Consensus        83 ~VG~~lLGRV~d~lG~piD~l~~~~~~~~~~~~~i~~~pp~p~~R~~i~e~l~TGIraID~l~pigkGQR~gIf~gsGvG  162 (427)
T PRK08149         83 WVGPALLGAVLDPTGKIVERFAPPTVAPISELRPIDVAPPSYAERRPIREPLITGVRAIDGLLTCGVGQRMGIFASAGCG  162 (427)
T ss_pred             ECCHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEECCCEEECCCCCCCCCCEEECCCCCCCC
T ss_conf             70751207977778888668898777765320304589968256078885000386431044532467540002789986


Q ss_pred             HHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHH
Q ss_conf             24899999998850578852687621643459999998542442001222344433231699971766896787777777
Q gi|254780615|r  162 KTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIDSKVNIDPRKNNGSAVGSKCSLLYGQMNEPPGARSRVALT  241 (478)
Q Consensus       162 KT~l~~~~i~n~~~~~~~v~V~~~iGER~rEv~e~~~e~~~~~~~~~~~~~~~~~~~~~tv~v~~~~~~~~~~r~~~~~~  241 (478)
T Consensus       163 Ks~Ll~~i~~~---~~adv~Via~IGeRgrEv~efi~~~~------------~~~~l~rsvvv~atsd~p~~~R~~a~~~  227 (427)
T PRK08149        163 KTMLMNMLIEH---TEADVFVIGLIGERGREVTEFVEMLR------------ASHKKEKCVLVYATSDFSSVDRCNAALV  227 (427)
T ss_pred             HHHHHHHHHHH---CCCCEEEEEEECCCHHHHHHHHHHHH------------CCCCCCEEEEEEECCCCCHHHHHHHHHH
T ss_conf             77999988863---58998999970233789999999750------------3685203689971588998999999988


Q ss_pred             HHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCC
Q ss_conf             87768999866996799971559998760124553114410110122356665788876317776532566654304766
Q gi|254780615|r  242 GLTVAEHFRDQGQDVLFFVDNIFRFTQANSEISALLGRIPSAVGYQSTLALEMGELQERITTTLKGSITSVQAIYVPADD  321 (478)
Q Consensus       242 a~tiAEyfrd~g~dVll~~Dsltr~a~A~rEisl~~g~~P~~~gYp~~~f~~~~~l~ERag~~~~GSIT~~~tV~~~~dD  321 (478)
T Consensus       228 a~tiAEyfrd~G~~VLl~~Dsltr~A~A~REisl~~ge~P~~~GYp~svf~~l~~l~ERag~~~~GSIT~~~tV~~~~dD  307 (427)
T PRK08149        228 ATTVAEYFRDQGKRVVLFIDSMTRYARALRDVALAAGELPARRGYPASVFDSLPRLLERPGATSAGSITAFYTVLLESEE  307 (427)
T ss_pred             HHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCC
T ss_conf             77899999867983799617578888899899986479998768785299887898762346789855467568724888


Q ss_pred             CCCHHHHHHHHHCCCEEEEEHHHHHCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             44105899997503425641156631886753223554311162012899999999999999989989999997365569
Q gi|254780615|r  322 LTDPAPATSFTHLDATTVLSRQISEKGIYPAIDPLDSNSSMLEIDIVGQEHYDVARRVQEILQRYKSLQDIIAILGMDEL  401 (478)
Q Consensus       322 ~~dpi~~~~~si~Dg~ivLsr~la~~g~~PAId~~~S~Sr~~~~~i~~~~h~~~a~~~r~~l~~y~el~~~i~~~g~~~l  401 (478)
T Consensus       308 ~tdPi~d~~~~ilDGhivLsr~la~~g~yPAIDvl~S~SR~~~-~i~~~~h~~~a~~~r~~la~y~e~~~li~iG~y~~g  386 (427)
T PRK08149        308 EADPIGDEIRSILDGHIYLSRKLAGQGHYPAIDVLKSVSRVFG-QVTDPKHRELAAAFRKLLTRLEELQLFIDLGEYRPG  386 (427)
T ss_pred             CCCCHHHHHHHHCCCEEEECHHHHHCCCCCCCCCCCCHHHCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             7876466555500636999676886599998187515543644-442599999999999999999999999984787679


Q ss_pred             CH-HHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECHHHHHHHHHHHHC
Q ss_conf             98-899999999999998349971100005789736159999999999976
Q gi|254780615|r  402 SE-EDKLVVARARKLERFMSQPFHVAESFTGLPGKFVSLEETIRGFKGLVQ  451 (478)
Q Consensus       402 ~~-~~~~~i~r~~~i~~fL~Qp~~~~e~ft~~~g~~v~~~eti~~~~~il~  451 (478)
T Consensus       387 ~~~~~d~ai~~~~~i~~fL~Q~~~e~~----------~~~~t~~~l~~la~  427 (427)
T PRK08149        387 ENADNDRAMDKRDSLEAFLKQPVDEKS----------SFSDTLERMNEFAD  427 (427)
T ss_pred             CCHHHHHHHHHHHHHHHHCCCCCCCCC----------CHHHHHHHHHHHHC
T ss_conf             998899999979999997489998884----------98999999998649