HHsearch alignment for GI: 254780615 and conserved domain: PRK13898
>PRK13898 type IV secretion system ATPase VirB4; Provisional.
Probab=91.18 E-value=0.22 Score=27.90 Aligned_cols=29 Identities=34% Similarity=0.417 Sum_probs=24.3
Q ss_pred CCEECCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 41003675666624899999998850578
Q gi|254780615|r 150 GKIGLFGGAGVGKTVLIMELINNVAKAHG 178 (478)
Q Consensus 150 qr~gIfgg~GvGKT~l~~~~i~n~~~~~~ 178 (478)
T Consensus 447 GHtlI~G~TGsGKTtl~~fL~aq~~ky~~ 475 (800)
T PRK13898 447 GHTLIIGPTGAGKTVLMNFLCAQAMKFSP 475 (800)
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 75699899999899999999999875488