HHsearch alignment for GI: 254780615 and conserved domain: TIGR02545
>TIGR02545 ATP_syn_fliI flagellar protein export ATPase FliI; InterPro: IPR013379 FliI proteins are involved in bacterial flagellum systems, acting to drive protein export for flagellar biosynthesis. The most closely related proteins are the YscN proteins of bacterial type III secretion systems.; GO: 0016887 ATPase activity, 0001539 ciliary or flagellar motility, 0009296 flagellum biogenesis, 0009288 flagellin-based flagellum.
Probab=100.00 E-value=0 Score=1091.28 Aligned_cols=418 Identities=31% Similarity=0.513 Sum_probs=393.5
Q ss_pred CCCCEEEEEEECCEEEEEECCCCC---CCCCEEEECCC--CCEEEEEEEEEECCCEEEEEECCCCCCCCCCCEEEECC--
Q ss_conf 534138999955789998166652---31418998169--95599999987089879999814878887888889779--
Q gi|254780615|r 7 TESVGRIQQIMGAVVDVVFVNSLP---PIFSSLETSDK--GSRIVFEVVQHLGEKTVRCIAMSRTDGLSRGDCVIDTG-- 79 (478)
Q Consensus 7 ~~~~GrV~~V~G~vvev~g~~~~~---~i~~~i~~~~~--g~~i~~EVV~~l~e~~V~~i~l~~t~GI~~G~~V~~tg-- 79 (478)
T Consensus 1 ~~~~G~V~~v~G~~~e~~Gp~~~~~~~G~~c~i~~~~~g~~~~~~aEVvGF-~~~~~~lmP~~~~~Gi~~G~~V~~~~~~ 79 (439)
T TIGR02545 1 VRIVGRVTKVAGLTVEVAGPKAAVARLGDLCEIEPQEGGEEKHVLAEVVGF-EGDRVILMPYEPLEGIRPGDRVFLLGDI 79 (439)
T ss_pred CCEEEEEEEEECCEEEEECCCCCEEECCCEEEEECCCCCCCCEEEEEEEEE-CCCEEEEEECCCCCCCCCCCEEEECCCC
T ss_conf 915889999884388985442130213627899658885210156899987-3883698644655562457657863431
Q ss_pred -----CEEEEECCHHHHHHHHHHHHHHCC----CCCCCCCHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf -----848988592376558878752301----67875300110023454441000013420002311002355702154
Q gi|254780615|r 80 -----TQITVPVGEATLGRIMNVIGEPVD----DQGAIISSEKRAIHQPSPSYTEQSTDASILTTGIKVIDLISPYQKGG 150 (478)
Q Consensus 80 -----~~l~VpVG~~lLGRViD~lG~PLD----g~g~i~~~~~~pi~~~~p~~~~R~~i~e~L~TGIkaID~l~pig~Gq 150 (478)
T Consensus 80 ad~~~~~~~~~~G~~LLGRv~D~lG~PlDg~G~~~~~~~~~~~~~l~~~~pnpl~R~rI~~~l~tGVRaId~lLT~GrGQ 159 (439)
T TIGR02545 80 ADAGGRSLSIPVGDELLGRVIDALGRPLDGKGAGGGLIDATVYRPLRREPPNPLDRRRIEEVLDTGVRAIDALLTIGRGQ 159 (439)
T ss_pred CCCCCCCCEECCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCC
T ss_conf 46545664202774440323867878657877888766565555656783074678757861121231011103655641
Q ss_pred CEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCC
Q ss_conf 10036756666248999999988505788526876216434599999985424420012223444332316999717668
Q gi|254780615|r 151 KIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIDSKVNIDPRKNNGSAVGSKCSLLYGQMNE 230 (478)
Q Consensus 151 r~gIfgg~GvGKT~l~~~~i~n~~~~~~~v~V~~~iGER~rEv~e~~~e~~~~~~~~~~~~~~~~~~~~~tv~v~~~~~~ 230 (478)
T Consensus 160 R~GIFAGSGVGKSTLLGMiAr~---t~ADV~VIALIGERGREV~EFiE~------------~LG~eGl~kSVVVVATSD~ 224 (439)
T TIGR02545 160 RLGIFAGSGVGKSTLLGMIARY---TEADVNVIALIGERGREVKEFIED------------DLGEEGLKKSVVVVATSDE 224 (439)
T ss_pred EEEEECCCCHHHHHHHHHHHCC---CCCCEEEEEEECCCCCCCHHHHHH------------HCCCCCCCCEEEEEECCCC
T ss_conf 0266337744478898887506---658878998444656643135543------------0351102540799827998
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHC---CCC-C
Q ss_conf 967877777778776899986699679997155999876012455311441011012235666578887631---777-6
Q gi|254780615|r 231 PPGARSRVALTGLTVAEHFRDQGQDVLFFVDNIFRFTQANSEISALLGRIPSAVGYQSTLALEMGELQERIT---TTL-K 306 (478)
Q Consensus 231 ~~~~r~~~~~~a~tiAEyfrd~g~dVll~~Dsltr~a~A~rEisl~~g~~P~~~gYp~~~f~~~~~l~ERag---~~~-~ 306 (478)
T Consensus 225 spl~R~~aA~~A~~iAEYFRDqGk~VLL~~DSlTRFAmAqREigLa~GEPP~tkGYpPSVF~~Lp~L~ERaG~~p~~~~~ 304 (439)
T TIGR02545 225 SPLMRIRAAYAATAIAEYFRDQGKDVLLLMDSLTRFAMAQREIGLAAGEPPTTKGYPPSVFSELPRLLERAGIVPGAKGG 304 (439)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 68999888899999999998649834776211788998988999871787666789704899999999870864698887
Q ss_pred CCEEEEEEEEECCCCCCCHHHHHHHHHCCCEEEEEHHHHHCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHH
Q ss_conf 53256665430476644105899997503425641156631886753223554311162012899999999999999989
Q gi|254780615|r 307 GSITSVQAIYVPADDLTDPAPATSFTHLDATTVLSRQISEKGIYPAIDPLDSNSSMLEIDIVGQEHYDVARRVQEILQRY 386 (478)
Q Consensus 307 GSIT~~~tV~~~~dD~~dpi~~~~~si~Dg~ivLsr~la~~g~~PAId~~~S~Sr~~~~~i~~~~h~~~a~~~r~~l~~y 386 (478)
T Consensus 305 GsITa~yTVLVeGDD~~ePiAD~~RgiLDGHIvLsR~lA~~G~YPaIDvl~SiSR~m~-~i~~~e~~~~a~~~r~l~a~Y 383 (439)
T TIGR02545 305 GSITAFYTVLVEGDDMNEPIADAVRGILDGHIVLSRKLAERGHYPAIDVLRSISRLMP-DIVSPEHNKAARKLRKLLATY 383 (439)
T ss_pred CEEEEEEEEEEECCCCCCHHHHHHHHHCCCEEEECHHHHHCCCCCCCCCCHHHHHHHH-HHCCHHHHHHHHHHHHHHHHH
T ss_conf 3056899998736899873787750010220773226764588987572222788777-627988999999999999988
Q ss_pred HHHHHHHHHHCCCCCCHHH-HHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECHHHHHHHHHHHHC
Q ss_conf 9899999973655699889-9999999999998349971100005789736159999999999976
Q gi|254780615|r 387 KSLQDIIAILGMDELSEED-KLVVARARKLERFMSQPFHVAESFTGLPGKFVSLEETIRGFKGLVQ 451 (478)
Q Consensus 387 ~el~~~i~~~g~~~l~~~~-~~~i~r~~~i~~fL~Qp~~~~e~ft~~~g~~v~~~eti~~~~~il~ 451 (478)
T Consensus 384 ~~~eDLi~iGaY~~GSdp~~D~AI~~~p~i~~FL~Q~~~E~~----------~~~~~~~~L~~i~~ 439 (439)
T TIGR02545 384 KDAEDLIRIGAYKKGSDPEVDKAIKLYPKIEAFLRQDIEEAS----------SFEESLEALKEILA 439 (439)
T ss_pred HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC----------CHHHHHHHHHHHHC
T ss_conf 888999981786468887899985100258998467975455----------77899999999829