HHsearch alignment for GI: 254780615 and conserved domain: TIGR02858

>TIGR02858 spore_III_AA stage III sporulation protein AA; InterPro: IPR014217 Proteins in this entry include the stage III sporulation protein AA that is encoded by one of several genes in the spoIIIA locus. This protein is only found in species that are capable of endospore formation..

Probab=96.56  E-value=0.002  Score=41.40  Aligned_cols=80  Identities=18%  Similarity=0.173  Sum_probs=52.9

Q ss_pred             CCCCCCCCCCCCCCCCC-CCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCC--CC--EEEEEECCCHHHHHHHHHHHHH
Q ss_conf             13420002311002355-7021541003675666624899999998850578--85--2687621643459999998542
Q gi|254780615|r  128 TDASILTTGIKVIDLIS-PYQKGGKIGLFGGAGVGKTVLIMELINNVAKAHG--GY--SVFAGVGERTREGNDLYHEMID  202 (478)
Q Consensus       128 ~i~e~L~TGIkaID~l~-pig~Gqr~gIfgg~GvGKT~l~~~~i~n~~~~~~--~v--~V~~~iGER~rEv~e~~~e~~~  202 (478)
T Consensus       101 IaRE~~G~A~~~~~yL~d~~~~~~NTLiIsPPq~GKTTlLRDlaR~~StG~~~~~~~g~KVgivDERS-EIAgC~~GvPQ  179 (282)
T TIGR02858       101 IAREVLGAADKILPYLVDRNGRVLNTLIISPPQCGKTTLLRDLARILSTGISKLGLKGKKVGIVDERS-EIAGCVNGVPQ  179 (282)
T ss_pred             EEEECCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCH-HHHHHCCCCCC
T ss_conf             02000577566688773058944678888688988510488898886078542468997469984324-65654588241


Q ss_pred             CCCCCC
Q ss_conf             442001
Q gi|254780615|r  203 SKVNID  208 (478)
Q Consensus       203 ~~~~~~  208 (478)
T Consensus       180 ~~vG~R  185 (282)
T TIGR02858       180 LDVGIR  185 (282)
T ss_pred             CCCCCC
T ss_conf             446760