HHsearch alignment for GI: 254780615 and conserved domain: TIGR03015
>TIGR03015 pepcterm_ATPase putative secretion ATPase, PEP-CTERM locus subfamily. Members of this protein are marked as probable ATPases by the nucleotide binding P-loop motif GXXGXGKTT, a motif DEAQ similar to the DEAD/H box of helicases, and extensive homology to ATPases of MSHA-type pilus systems and to GspA proteins associated with type II protein secretion systems.
Probab=95.93 E-value=0.064 Score=31.45 Aligned_cols=84 Identities=21% Similarity=0.245 Sum_probs=44.9
Q ss_pred CEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCC
Q ss_conf 10036756666248999999988505788526876216434599999985424420012223444332316999717668
Q gi|254780615|r 151 KIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIDSKVNIDPRKNNGSAVGSKCSLLYGQMNE 230 (478)
Q Consensus 151 r~gIfgg~GvGKT~l~~~~i~n~~~~~~~v~V~~~iGER~rEv~e~~~e~~~~~~~~~~~~~~~~~~~~~tv~v~~~~~~ 230 (478)
T Consensus 45 ~~lltGe~GtGKTtllr~l~~~l~---~~~~~~~~i~~~~l~~~~ll~~i~~~lg---------~---~-----~~~~~~ 104 (269)
T TIGR03015 45 FILITGEVGAGKTTLIRNLLKRLD---QERVVAAKLVNTRVDAEDLLRMVAADFG---------L---E-----TEGRDK 104 (269)
T ss_pred EEEEECCCCCCHHHHHHHHHHHCC---CCCEEEEEECCCCCCHHHHHHHHHHHCC---------C---C-----CCCCCH
T ss_conf 599972998988999999998459---3454899976999999999999999859---------8---9-----889899
Q ss_pred CHHHHHHHHHHHHHHHHHHH---HCCCCEEEEEEC
Q ss_conf 96787777777877689998---669967999715
Q gi|254780615|r 231 PPGARSRVALTGLTVAEHFR---DQGQDVLFFVDN 262 (478)
Q Consensus 231 ~~~~r~~~~~~a~tiAEyfr---d~g~dVll~~Ds 262 (478)
T Consensus 105 ~~~~--~------~l~~~L~~~~~~g~~~vliIDE 131 (269)
T TIGR03015 105 AALL--R------ELEDFLIEQFAAGKRALLVVDE 131 (269)
T ss_pred HHHH--H------HHHHHHHHHHHCCCCEEEEEEC
T ss_conf 9999--9------9999999999669946999724