>cd01134 V_A-ATPase_A V/A-type ATP synthase catalytic subunit A. These ATPases couple ATP hydrolysis to the build up of a H+ gradient, but V-type ATPases do not catalyze the reverse reaction. The Vacuolar (V-type) ATPase is found in the membranes of vacuoles, the golgi apparatus and in other coated vesicles in eukaryotes. Archaea have a protein which is similar in sequence to V-ATPases, but functions like an F-ATPase (called A-ATPase). A similar protein is also found in a few bacteria.

Probab=100.00 E-value=0 Score=643.63 Aligned_cols=269 Identities=28% Similarity=0.421 Sum_probs=240.7 Q ss_pred ECCHHHHHHHHHHHHHHCC----------CCCCCCCHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEC Q ss_conf 8592376558878752301----------678753001100234544410000134200023110023557021541003 Q gi|254780615|r 85 PVGEATLGRIMNVIGEPVD----------DQGAIISSEKRAIHQPSPSYTEQSTDASILTTGIKVIDLISPYQKGGKIGL 154 (478) Q Consensus 85 pVG~~lLGRViD~lG~PLD----------g~g~i~~~~~~pi~~~~p~~~~R~~i~e~L~TGIkaID~l~pig~Gqr~gI 154 (478) T Consensus 84 p~~~G~v~~i~~~g~y~v~~~~~~~~~~g~~~~~~m~q~WPVr~prP-v~er~~~~~PL~TGir~ID~l~Pig~Gqr~~I 162 (369) T cd01134 84 PRVRGTVTYIAPAGDYTVDDVILEVEFDGKKEEITMVQKWPVRQPRP-VKEKLPPNEPLLTGQRVLDTLFPVVKGGTAAI 162 (369) T ss_pred CCCCEEEEEEECCCCCEEEEEEEEECCCCCEEEEEEEEECCCCCCCC-CCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEE T ss_conf 98737999991589852465699970689846877887077566775-11138999862653568874253214764677 Q ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHH Q ss_conf 67566662489999999885057885268762164345999999854244200122234443323169997176689678 Q gi|254780615|r 155 FGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIDSKVNIDPRKNNGSAVGSKCSLLYGQMNEPPGA 234 (478) Q Consensus 155 fgg~GvGKT~l~~~~i~n~~~~~~~v~V~~~iGER~rEv~e~~~e~~~~~~~~~~~~~~~~~~~~~tv~v~~~~~~~~~~ 234 (478) T Consensus 163 ~g~~g~GKT~l~~~i~k~---~~~dv~Vyv~iGeRg~ev~e~l~~f~el~~-----~~~g~~~~~rtvvVa~ts~~p~~~ 234 (369) T cd01134 163 PGPFGCGKTVIQQSLSKY---SNSDIVIYVGCGERGNEMTEVLEEFPELTD-----PVTGEPLMKRTVLIANTSNMPVAA 234 (369) T ss_pred ECCCCCCHHHHHHHHHHC---CCCCEEEEEEEECCHHHHHHHHHHHHHHCC-----CCCCCCHHHCEEEEECCCCCCHHH T ss_conf 668776899999999853---799889999971141899999998677413-----334664102036874277799889 Q ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHCCC-------CCC Q ss_conf 7777777877689998669967999715599987601245531144101101223566657888763177-------765 Q gi|254780615|r 235 RSRVALTGLTVAEHFRDQGQDVLFFVDNIFRFTQANSEISALLGRIPSAVGYQSTLALEMGELQERITTT-------LKG 307 (478) Q Consensus 235 r~~~~~~a~tiAEyfrd~g~dVll~~Dsltr~a~A~rEisl~~g~~P~~~gYp~~~f~~~~~l~ERag~~-------~~G 307 (478) T Consensus 235 r~~s~y~g~tiAEyfRd~G~~Vll~~DslsR~A~A~REisl~l~e~P~~egYP~~l~s~l~~l~ERag~~~~~~~~~~~G 314 (369) T cd01134 235 REASIYTGITIAEYFRDMGYNVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLGARLASFYERAGRVKCLGSPGREG 314 (369) T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC T ss_conf 98889899999999996898879980758999999889988638998765719319988889987214432368999981 Q ss_pred CEEEEEEEEECCCCCCCHHHHHHHHHCCCEEEEEHHHHHCCCCCCCCCCCCCCCC Q ss_conf 3256665430476644105899997503425641156631886753223554311 Q gi|254780615|r 308 SITSVQAIYVPADDLTDPAPATSFTHLDATTVLSRQISEKGIYPAIDPLDSNSSM 362 (478) Q Consensus 308 SIT~~~tV~~~~dD~~dpi~~~~~si~Dg~ivLsr~la~~g~~PAId~~~S~Sr~ 362 (478) T Consensus 315 SiT~~~~V~~~ggD~s~pI~~~~~si~d~~i~L~~~La~~g~~PAId~~~S~Sry 369 (369) T cd01134 315 SVTIVGAVSPPGGDFSEPVTQATLRIVQVFWGLDKKLAQRRHFPSINWLISYSKY 369 (369) T ss_pred EEEEEEEEECCCCCCCCCHHHHHHHHHCEEEEECHHHHHCCCCCCCCCCCCCCCC T ss_conf 1778989975698867757888876621588985889867999971874366588

HHsearch alignment for GI: 254780615 and conserved domain: cd01134