>cd01135 V_A-ATPase_B V/A-type ATP synthase (non-catalytic) subunit B. These ATPases couple ATP hydrolysis to the build up of a H+ gradient, but V-type ATPases do not catalyze the reverse reaction. The Vacuolar (V-type) ATPase is found in the membranes of vacuoles, the golgi apparatus and in other coated vesicles in eukaryotes. Archaea have a protein which is similar in sequence to V-ATPases, but functions like an F-ATPase (called A-ATPase). A similar protein is also found in a few bacteria. This subfamily consists of the non-catalytic beta subunit.

Probab=100.00 E-value=0 Score=740.25 Aligned_cols=270 Identities=28% Similarity=0.449 Sum_probs=259.9 Q ss_pred EEEEECCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCC Q ss_conf 48988592376558878752301678753001100234544410000134200023110023557021541003675666 Q gi|254780615|r 81 QITVPVGEATLGRIMNVIGEPVDDQGAIISSEKRAIHQPSPSYTEQSTDASILTTGIKVIDLISPYQKGGKIGLFGGAGV 160 (478) Q Consensus 81 ~l~VpVG~~lLGRViD~lG~PLDg~g~i~~~~~~pi~~~~p~~~~R~~i~e~L~TGIkaID~l~pig~Gqr~gIfgg~Gv 160 (478) T Consensus 1 sl~VpVG~~lLGRVvd~lG~PiDg~~~i~~~~~~~i~~~ap~p~~R~~v~e~l~TGIkaID~l~pig~GQR~gIfgg~Gv 80 (276) T cd01135 1 TLKVPVSEDMLGRIFNGSGKPIDGGPEILAEEYLDINGPPINPVARIYPEEMIQTGISAIDGMNTLVRGQKIPIFSGSGL 80 (276) T ss_pred CEEEECCCCCCCCEECCCCCCCCCCCCCCCCCEEECCCCCCCCHHCCCCCCCCCCCCEEEECCCCCCCCCEEEECCCCCC T ss_conf 96987477733747458833127999999986402458997804406778632258535405467236766332057886 Q ss_pred CHHHHHHHHHHHHH---HCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHH Q ss_conf 62489999999885---057885268762164345999999854244200122234443323169997176689678777 Q gi|254780615|r 161 GKTVLIMELINNVA---KAHGGYSVFAGVGERTREGNDLYHEMIDSKVNIDPRKNNGSAVGSKCSLLYGQMNEPPGARSR 237 (478) Q Consensus 161 GKT~l~~~~i~n~~---~~~~~v~V~~~iGER~rEv~e~~~e~~~~~~~~~~~~~~~~~~~~~tv~v~~~~~~~~~~r~~ 237 (478) T Consensus 81 GKs~L~~~i~~~~~~~~~~~~~v~V~~~IGer~rev~e~~~~l~~------------~~~l~~tvvv~ata~~~p~~r~~ 148 (276) T cd01135 81 PHNELAAQIARQAGVVGEEENFAVVFAAMGITMEDARFFKDDFEE------------TGALERVVLFLNLANDPTIERII 148 (276) T ss_pred CHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEHHHHHHHHHHHHC------------CCCCCCEEEEEECCCCCHHHHHH T ss_conf 367899999998775136887359996155532579999999871------------66512101466348897688878 Q ss_pred HHHHHHHHHHHHH-HCCCCEEEEEECHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHCCCC--CCCEEEEEE Q ss_conf 7777877689998-6699679997155999876012455311441011012235666578887631777--653256665 Q gi|254780615|r 238 VALTGLTVAEHFR-DQGQDVLFFVDNIFRFTQANSEISALLGRIPSAVGYQSTLALEMGELQERITTTL--KGSITSVQA 314 (478) Q Consensus 238 ~~~~a~tiAEyfr-d~g~dVll~~Dsltr~a~A~rEisl~~g~~P~~~gYp~~~f~~~~~l~ERag~~~--~GSIT~~~t 314 (478) T Consensus 149 a~~~a~aiAEyFr~~~Gk~VLl~~D~ltr~A~A~REisl~~g~~P~~~gYp~~vf~~l~~l~ERag~~~~~~GSITa~~~ 228 (276) T cd01135 149 TPRMALTTAEYLAYEKGKHVLVILTDMTNYAEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRVEGRNGSITQIPI 228 (276) T ss_pred HHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEE T ss_conf 88887789999887369977999456889999999999864899987888850998867888722467999801899989 Q ss_pred EEECCCCCCCHHHHHHHHHCCCEEEEEHHHHHCCCCCCCCCCCCCCCC Q ss_conf 430476644105899997503425641156631886753223554311 Q gi|254780615|r 315 IYVPADDLTDPAPATSFTHLDATTVLSRQISEKGIYPAIDPLDSNSSM 362 (478) Q Consensus 315 V~~~~dD~~dpi~~~~~si~Dg~ivLsr~la~~g~~PAId~~~S~Sr~ 362 (478) T Consensus 229 v~~~~dD~~~pi~~~~~si~DG~i~Lsr~la~~G~~PAId~~~S~SRv 276 (276) T cd01135 229 LTMPNDDITHPIPDLTGYITEGQIVLDRQLHNRGIYPPINVLPSLSRL 276 (276) T ss_pred EECCCCCCCCCHHHHHHHHCCEEEEECHHHHHCCCCCCCCCCCCCCCC T ss_conf 944798867766777765604599997999967999970875576679

HHsearch alignment for GI: 254780615 and conserved domain: cd01135