HHsearch alignment for GI: 254780615 and conserved domain: cd03218
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=93.63 E-value=0.029 Score=33.71 Aligned_cols=35 Identities=29% Similarity=0.514 Sum_probs=27.7
Q ss_pred CCC-CCCCCCCCCCCEECCCCCCCCHHHHHHHHHHH
Q ss_conf 100-23557021541003675666624899999998
Q gi|254780615|r 138 KVI-DLISPYQKGGKIGLFGGAGVGKTVLIMELINN 172 (478)
Q Consensus 138 kaI-D~l~pig~Gqr~gIfgg~GvGKT~l~~~~i~n 172 (478)
T Consensus 14 ~~l~~vs~~v~~Gei~~llGpNGAGKSTll~~i~Gl 49 (232)
T cd03218 14 KVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGL 49 (232)
T ss_pred EEECCEEEEECCCCEEEEECCCCCCHHHHHHHHHCC
T ss_conf 988260679899959999999996199999999779