>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.

Probab=94.48  E-value=0.019  Score=34.98  Aligned_cols=37  Identities=27%  Similarity=0.388  Sum_probs=29.4

Q ss_pred             CCCCCCC-CCCCCCCCCEECCCCCCCCHHHHHHHHHHH
Q ss_conf             3110023-557021541003675666624899999998
Q gi|254780615|r  136 GIKVIDL-ISPYQKGGKIGLFGGAGVGKTVLIMELINN  172 (478)
Q Consensus       136 GIkaID~-l~pig~Gqr~gIfgg~GvGKT~l~~~~i~n  172 (478)
T Consensus        34 ~~~AL~~isf~i~~GeivgilG~NGaGKSTLl~~i~Gl   71 (224)
T cd03220          34 EFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGI   71 (224)
T ss_pred             CEEEECCEEEEECCCCEEEEECCCCCHHHHHHHHHHCC
T ss_conf             96987670789838989999979998199999999758