HHsearch alignment for GI: 254780615 and conserved domain: cd03231
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=94.17 E-value=0.028 Score=33.81 Aligned_cols=40 Identities=25% Similarity=0.330 Sum_probs=29.0
Q ss_pred CCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCE
Q ss_conf 23557021541003675666624899999998850578852
Q gi|254780615|r 141 DLISPYQKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYS 181 (478)
Q Consensus 141 D~l~pig~Gqr~gIfgg~GvGKT~l~~~~i~n~~~~~~~v~ 181 (478)
T Consensus 18 ~vs~~i~~Ge~~~l~G~NGsGKSTLlk~i~-Gl~~p~sG~i 57 (201)
T cd03231 18 GLSFTLAAGEALQVTGPNGSGKTTLLRILA-GLSPPLAGRV 57 (201)
T ss_pred CCEEEECCCCEEEEECCCCCCHHHHHHHHH-CCCCCCCEEE
T ss_conf 307888799599999999999999999996-6778885299