HHsearch alignment for GI: 254780615 and conserved domain: cd03236

>cd03236 ABC_RNaseL_inhibitor_domain1 The ATPase domain 1 of RNase L inhibitor. The ABC ATPase, RNase L inhibitor (RLI), is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI s are not transport proteins and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLIs have an N-terminal Fe-S domain and two nucleotide binding domains which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.
Probab=94.51  E-value=0.024  Score=34.21  Aligned_cols=25  Identities=32%  Similarity=0.626  Sum_probs=22.0

Q ss_pred             CCCCCEECCCCCCCCHHHHHHHHHH
Q ss_conf             2154100367566662489999999
Q gi|254780615|r  147 QKGGKIGLFGGAGVGKTVLIMELIN  171 (478)
Q Consensus       147 g~Gqr~gIfgg~GvGKT~l~~~~i~  171 (478)
T Consensus        24 k~GEi~gLiGpNGaGKSTLlk~i~G   48 (255)
T cd03236          24 REGQVLGLVGPNGIGKSTALKILAG   48 (255)
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHC
T ss_conf             8980999989999709999999967