HHsearch alignment for GI: 254780615 and conserved domain: cd03245
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=95.31 E-value=0.0079 Score=37.43 Aligned_cols=32 Identities=25% Similarity=0.447 Sum_probs=26.3
Q ss_pred CCCCCCCCCCCEECCCCCCCCHHHHHHHHHHH
Q ss_conf 23557021541003675666624899999998
Q gi|254780615|r 141 DLISPYQKGGKIGLFGGAGVGKTVLIMELINN 172 (478)
Q Consensus 141 D~l~pig~Gqr~gIfgg~GvGKT~l~~~~i~n 172 (478)
T Consensus 22 ~isl~i~~G~~v~ivG~sGsGKSTLl~ll~gl 53 (220)
T cd03245 22 NVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGL 53 (220)
T ss_pred CEEEEECCCCEEEEECCCCCHHHHHHHHHHCC
T ss_conf 45999879999999999998599999999672