HHsearch alignment for GI: 254780615 and conserved domain: cd03256
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=94.77 E-value=0.012 Score=36.24 Aligned_cols=44 Identities=25% Similarity=0.399 Sum_probs=31.0
Q ss_pred CCCCCCCC-CCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 23110023-5570215410036756666248999999988505788
Q gi|254780615|r 135 TGIKVIDL-ISPYQKGGKIGLFGGAGVGKTVLIMELINNVAKAHGG 179 (478)
Q Consensus 135 TGIkaID~-l~pig~Gqr~gIfgg~GvGKT~l~~~~i~n~~~~~~~ 179 (478)
T Consensus 12 ~g~~~L~~isl~i~~Ge~~~iiGpsGsGKSTLl~~i~g-l~~p~~G 56 (241)
T cd03256 12 NGKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNG-LVEPTSG 56 (241)
T ss_pred CCCEEEECCEEEECCCCEEEEECCCCCHHHHHHHHHHC-CCCCCCE
T ss_conf 79889978388999998999999998339999999974-9999855