HHsearch alignment for GI: 254780615 and conserved domain: cd03288
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=95.24 E-value=0.01 Score=36.68 Aligned_cols=45 Identities=24% Similarity=0.470 Sum_probs=30.9
Q ss_pred CCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEE
Q ss_conf 2355702154100367566662489999999885057885268762
Q gi|254780615|r 141 DLISPYQKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 186 (478)
Q Consensus 141 D~l~pig~Gqr~gIfgg~GvGKT~l~~~~i~n~~~~~~~v~V~~~i 186 (478)
T Consensus 39 ~inl~I~~Ge~vaIvG~sGsGKSTL~~ll~gl-~~p~~G~I~idg~ 83 (257)
T cd03288 39 HVKAYIKPGQKVGICGRTGSGKSSLSLAFFRM-VDIFDGKIVIDGI 83 (257)
T ss_pred CEEEEECCCCEEEEECCCCCCHHHHHHHHHHC-CCCCCCEEEECCE
T ss_conf 53899879999999999998199999999605-6678888999989