HHsearch alignment for GI: 254780615 and conserved domain: pfam08423
>pfam08423 Rad51 Rad51. Rad51 is a DNA repair and recombination protein and is a homologue of the bacterial ATPase RecA protein.
Probab=96.87 E-value=0.0047 Score=38.93 Aligned_cols=133 Identities=17% Similarity=0.208 Sum_probs=75.5
Q ss_pred CCCCHHHCCCCCCCCCCCCCCCCCCC--CCCCCCEECCCCCCCCHHHHHHHHHHHHHH-----CCCCCEEEEEE-C-CCH
Q ss_conf 44410000134200023110023557--021541003675666624899999998850-----57885268762-1-643
Q gi|254780615|r 120 SPSYTEQSTDASILTTGIKVIDLISP--YQKGGKIGLFGGAGVGKTVLIMELINNVAK-----AHGGYSVFAGV-G-ERT 190 (478)
Q Consensus 120 ~p~~~~R~~i~e~L~TGIkaID~l~p--ig~Gqr~gIfgg~GvGKT~l~~~~i~n~~~-----~~~~v~V~~~i-G-ER~ 190 (478)
T Consensus 12 ~~~~~~~r~~~~~isTg~~~LD~lLgGGi~~g~ITEi~G~~gsGKTQlc~qlav~~qlp~~~gg~~g~vvyIDTEg~f~~ 91 (261)
T pfam08423 12 ATELHQRRSEVIRITTGSKELDKLLGGGIETGSITEVFGEFRTGKTQLCHTLCVTCQLPLEMGGGEGKALYIDTEGTFRP 91 (261)
T ss_pred HHHHHHHHCCCCEECCCCHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCHHHHCCCCCEEEEEECCCCCCH
T ss_conf 99999975487357789878998737986677299998998887899999999994070965699972899936888698
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHH
Q ss_conf 4599999985424420012223444332316999717668967877777778776899986699679997155999876
Q gi|254780615|r 191 REGNDLYHEMIDSKVNIDPRKNNGSAVGSKCSLLYGQMNEPPGARSRVALTGLTVAEHFRDQGQDVLFFVDNIFRFTQA 269 (478)
Q Consensus 191 rEv~e~~~e~~~~~~~~~~~~~~~~~~~~~tv~v~~~~~~~~~~r~~~~~~a~tiAEyfrd~g~dVll~~Dsltr~a~A 269 (478)
T Consensus 92 eRl~qia~~~----------~~~~~~~L~~I~-v~r~~~~--~~~~~~l~---~~~~~~~-~~~v~LvVvDSiaalfR~ 153 (261)
T pfam08423 92 ERIVAIAERF----------GLDPEEVLDNIA-YARAYNT--EHQMQLLL---QAAAMMS-ESRFALLIVDSATALYRT 153 (261)
T ss_pred HHHHHHHHHH----------CCCHHHHHHHCE-ECCCCCH--HHHHHHHH---HHHHHHH-CCCCEEEEEECCCEEEEE
T ss_conf 9999999982----------999789875331-4168998--99999999---9999873-178349998324002333