RPSBLAST alignment for GI: 254780615 and conserved domain: TIGR01026
>gnl|CDD|162162 TIGR01026, fliI_yscN, ATPase FliI/YscN family. This family of ATPases demonstrates extensive homology with ATP synthase F1, beta subunit. It is a mixture of members with two different protein functions. The first group is exemplified by Salmonella typhimurium FliI protein. It is needed for flagellar assembly, its ATPase activity is required for flagellation, and it may be involved in a specialized protein export pathway that proceeds without signal peptide cleavage. The second group of proteins function in the export of virulence proteins; exemplified by Yersinia sp. YscN protein an ATPase involved in the type III secretory pathway for the antihost Yops proteins. Length = 440
Score = 211 bits (539), Expect = 3e-55
Identities = 134/434 (30%), Positives = 220/434 (50%), Gaps = 33/434 (7%)
Query: 10 VGRIQQIMGAVVDVVFVNSLPPIFSSLETSDKGS--RIVFEVVQHLGEKTVRCIAMSRTD 67
VGR+ ++ G +++ V + +GS R+V EVV GE V + +
Sbjct: 24 VGRVTKVKGLLIEAVGPQ--ASVGDLCLIERRGSEGRLVAEVVGFNGEF-VFLMPYEEVE 80
Query: 68 GLSRGDCVIDTGTQITVPVGEATLGRIMNVIGEPVDDQGAIIS-SEKRAIHQPSPSYTEQ 126
G+ G V+ TG +++ VG+ LGR+++ +G+P+D +G + E + + ++
Sbjct: 81 GVRPGSKVLATGEGLSIKVGDGLLGRVLDGLGKPIDGKGKFLDNVETEGLITAPINPLKR 140
Query: 127 STDASILTTGIKVIDLISPYQKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 186
+ IL+TG++ ID + KG +IG+F G+GVGK+ L + +I +A +V A +
Sbjct: 141 APIREILSTGVRSIDGLLTVGKGQRIGIFAGSGVGKSTL-LGMIARNTEAD--VNVIALI 197
Query: 187 GERTREGNDLYHEMIDSKVNIDPRKNNGSAVGSKCSLLYGQMNEPPGARSRVALTGLTVA 246
GER RE E I+ + + K + ++ ++ P R + A +A
Sbjct: 198 GERGREVR----EFIEHDLGEEGLK--------RSVVVVATSDQSPLLRLKGAYVATAIA 245
Query: 247 EHFRDQGQDVLFFVDNIFRFTQANSEISALLGRIPSAVGYQSTLALEMGELQERITTTLK 306
E+FRDQG+DVL +D++ RF A EI G P+ GY ++ + L ER + K
Sbjct: 246 EYFRDQGKDVLLLMDSVTRFAMAQREIGLAAGEPPATKGYTPSVFSTLPRLLERAGASGK 305
Query: 307 GSITSVQAIYVPADDLTDPAPATSFTHLDATTVLSRQISEKGIYPAIDPLDSNSSMLEID 366
GSIT+ + V DD+ +P + LD VLSR ++++G YPAID L S S ++
Sbjct: 306 GSITAFYTVLVEGDDMNEPIADSVRGILDGHIVLSRALAQRGHYPAIDVLASISRLMT-A 364
Query: 367 IVGQEHYDVARRVQEILQRYKSLQDIIAI----LGMDELSEEDKLVVARARKLERFMSQ- 421
IV +EH AR+ +E+L +YK +D+I I G D + +A+ KLERF+ Q
Sbjct: 365 IVSEEHRRAARKFRELLSKYKDNEDLIRIGAYQRGSDRELDF---AIAKYPKLERFLKQG 421
Query: 422 ---PFHVAESFTGL 432
+ ES L
Sbjct: 422 INEKVNFEESLQQL 435