RPSBLAST alignment for GI: 254780615 and conserved domain: cd01132

>gnl|CDD|29998 cd01132, F1_ATPase_alpha, F1 ATP synthase alpha, central domain. The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain, F1, is composed of alpha, beta, gamma, delta and epsilon subunits with a stoichiometry of 3:3:1:1:1. The alpha subunit of the F1 ATP synthase can bind nucleotides, but is non-catalytic.. Length = 274
 Score =  100 bits (250), Expect = 1e-21
 Identities = 75/290 (25%), Positives = 119/290 (41%), Gaps = 41/290 (14%)

Query: 82  ITVPVGEATLGRIMNVIGEPVDDQGAIISSEKRAIHQPSPSYTEQSTDASILTTGIKVID 141
             VPVGEA LGR+++ +G P+D +G I + E+R I   +P    + +    L TGIK ID
Sbjct: 2   ADVPVGEALLGRVVDALGNPIDGKGPIETKERRPIESKAPGIIPRKSVNEPLQTGIKAID 61

Query: 142 LISPYQKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMI 201
            + P  +G +  + G    GKT + ++ I N  K    Y ++  +G++            
Sbjct: 62  AMIPIGRGQRELIIGDRQTGKTAIAIDTIIN-QKGKKVYCIYVAIGQK------------ 108

Query: 202 DSKVNIDPRKNNGSAVGSKCSLL--YGQM----------NEPPGARSRVALTGLTVAEHF 249
                        S V      L  +G M          ++P   +     TG  + E+F
Sbjct: 109 ------------ASTVAQVVKTLEEHGAMEYTIVVAATASDPAPLQYLAPYTGCAMGEYF 156

Query: 250 RDQGQDVLFFVDNIFRFTQANSEISALLGRIPSAVGYQSTLALEMGELQERITTTLK--- 306
            D G+  L   D++ +   A  ++S LL R P    Y   +      L ER         
Sbjct: 157 MDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNDELG 216

Query: 307 -GSITSVQAIYVPADDLTDPAPATSFTHLDATTVLSRQISEKGIYPAIDP 355
            GS+T++  I   A D++   P    +  D    L   +  KGI PAI+ 
Sbjct: 217 GGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETDLFNKGIRPAINV 266