RPSBLAST alignment for GI: 254780615 and conserved domain: cd01132
>gnl|CDD|29998 cd01132, F1_ATPase_alpha, F1 ATP synthase alpha, central domain. The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain, F1, is composed of alpha, beta, gamma, delta and epsilon subunits with a stoichiometry of 3:3:1:1:1. The alpha subunit of the F1 ATP synthase can bind nucleotides, but is non-catalytic.. Length = 274
Score = 100 bits (250), Expect = 1e-21
Identities = 75/290 (25%), Positives = 119/290 (41%), Gaps = 41/290 (14%)
Query: 82 ITVPVGEATLGRIMNVIGEPVDDQGAIISSEKRAIHQPSPSYTEQSTDASILTTGIKVID 141
VPVGEA LGR+++ +G P+D +G I + E+R I +P + + L TGIK ID
Sbjct: 2 ADVPVGEALLGRVVDALGNPIDGKGPIETKERRPIESKAPGIIPRKSVNEPLQTGIKAID 61
Query: 142 LISPYQKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMI 201
+ P +G + + G GKT + ++ I N K Y ++ +G++
Sbjct: 62 AMIPIGRGQRELIIGDRQTGKTAIAIDTIIN-QKGKKVYCIYVAIGQK------------ 108
Query: 202 DSKVNIDPRKNNGSAVGSKCSLL--YGQM----------NEPPGARSRVALTGLTVAEHF 249
S V L +G M ++P + TG + E+F
Sbjct: 109 ------------ASTVAQVVKTLEEHGAMEYTIVVAATASDPAPLQYLAPYTGCAMGEYF 156
Query: 250 RDQGQDVLFFVDNIFRFTQANSEISALLGRIPSAVGYQSTLALEMGELQERITTTLK--- 306
D G+ L D++ + A ++S LL R P Y + L ER
Sbjct: 157 MDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNDELG 216
Query: 307 -GSITSVQAIYVPADDLTDPAPATSFTHLDATTVLSRQISEKGIYPAIDP 355
GS+T++ I A D++ P + D L + KGI PAI+
Sbjct: 217 GGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLETDLFNKGIRPAINV 266