HHsearch alignment for GI: 254780616 and conserved domain: PRK13426

>PRK13426 F0F1 ATP synthase subunit gamma; Provisional.
Probab=100.00  E-value=0  Score=612.43  Aligned_cols=288  Identities=31%  Similarity=0.475  Sum_probs=263.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEE
Q ss_conf             98879999999987568999999999999999999999983023699999999999730157544210002443334325
Q gi|254780616|r    1 MTSLKEFKSRIHSVKETQKITEAMQLISVTKLRRAKEAIQNASSYQFHIKDFFMKCVVGEHFQEYPSPFVRGTGKDKVYL   80 (294)
Q Consensus         1 M~~lk~ik~RI~sv~~~~KITkaMkmVA~skl~ka~~~~~~~~~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (294)
T Consensus         1 Maslk~ik~RI~SV~~t~kITkAMkmVAasKlrkaq~~~~~~r~Y~~~l~~~l~~l~~~--~~~~~~~~~~~~~~-~~~~   77 (289)
T PRK13426          1 MASLKEVKTRINSVKSTRKITSAMKMVASAKLHKAQGAIENMLPYQRKLNAILTNFLSA--DLDVESPFTVKREV-KRVA   77 (289)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC--CCCCCCCCCCCCCC-CEEE
T ss_conf             99879999999998798999999999999999999999982373999999999999852--78876744346888-7289


Q ss_pred             EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCC-CCEEEEEEECHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHH
Q ss_conf             531146424420011479999999876532038-8503888704037985102333201111147766403688999997
Q gi|254780616|r   81 LVICTAEKGLCGGFNAQIIRFARDRIKEFIAEG-KEIKLLIIGRKGYEGLRKEFSSMIIDSIELSSKKGVDFVQAHGIAR  159 (294)
Q Consensus        81 ~IvitSDrGLCG~~Ns~i~k~~~~~i~~~~~~~-~~~~l~~vGkKg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~  159 (294)
T Consensus        78 iivitSDrGLCG~fNs~i~k~~~~~i~~~~~~~~~~~~l~~iGkK~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~  155 (289)
T PRK13426         78 IVAFSSNTSLCGTFNANIIKMLLQTIGEYRELGQDNILIYPVGKKIEEAVKKLGFKPEGDYQTLAD--KPSYQEAAALAK  155 (289)
T ss_pred             EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHCCCCEEHHHCCCCC--CCCHHHHHHHHH
T ss_conf             999769974112002899999999999998659962899970558999999769851104236677--999999999999


Q ss_pred             HHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             65576506787505886201134432220442047887354221100365543224799678789999989999999999
Q gi|254780616|r  160 QITSLFTSNVFDLCFFIYSEFKSIIQQIPIISKIIPVDWSQDLEQKQQDILSVYRYESTLYSVLDDIVLRSISSRVFWII  239 (294)
Q Consensus       160 ~l~~~~~~~~~d~v~iiYn~f~s~~~q~p~~~~llP~~~~~~~~~~~~~~~~~~~~Ep~~~~il~~l~~~yl~~~l~~al  239 (294)
T Consensus       156 ~l~~~~~~~~~d~v~iiYn~f~s~~~q~~~~~~llP~~~~~~~~~~~~~~~~~~~~EP~~~~il~~l~~~yl~~~ly~al  235 (289)
T PRK13426        156 RLMELFLEGKIDRVELLYHHFKSMGVQVLLRETYLPIDLSQVKNEEEAGVVNDYIIEPSADELINDLIPKVLSQKIFTVL  235 (289)
T ss_pred             HHHHHHHCCCCCEEEEEEECCCCCEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999756898738885101445422113568724887321213100256764212888789999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             999999999999999999998999999999999999898898899999852531
Q gi|254780616|r  240 LENKASEVGARITAMDNATRNAGQMVDNLVLSYNRQRQMRITTELIEIIAGAEV  293 (294)
Q Consensus       240 les~aSE~aaRm~AM~~At~Na~~~i~~L~l~~Nk~RQ~~IT~El~EIisGaeA  293 (294)
T Consensus       236 les~asE~aaRm~AM~~At~Na~e~i~~Ltl~yNr~RQa~IT~El~EIvsGaeA  289 (289)
T PRK13426        236 LDSNASEHAARTLAMQIATDNANELIQELTKQYNKTRQQAITNELLDIVGGSMA  289 (289)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             999999999999999999995999999999999999999989999999713169