HHsearch results for GI: 254780616 and protein with PDBid: 2ck3_G
>2ck3_G ATP synthase gamma chain; ATP phosphorylase, ATP phosphorylase (H+ transporting), F1FO ATP synthase, F1-ATPase, hydrolase, ATP synthesis; HET: ANP ADP; 1.9A {Bos taurus} SCOP: c.49.2.1 PDB: 1cow_G* 1bmf_G* 1e1q_G* 1e1r_G* 1efr_G* 1e79_G* 1h8h_G* 1nbm_G* 1ohh_G* 1qo1_G 1w0j_G* 1w0k_G* 1h8e_G* 2jiz_G* 2jj1_G* 2jj2_G* 2v7q_G* 2wss_G* 2xnd_G* 2w6j_G ...
Probab=100.00 E-value=0 Score=549.88 Aligned_cols=272 Identities=29% Similarity=0.442 Sum_probs=239.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 88799999999875689999999999999999999999830236999999999997301575442100024433343255
Q gi|254780616|r 2 TSLKEFKSRIHSVKETQKITEAMQLISVTKLRRAKEAIQNASSYQFHIKDFFMKCVVGEHFQEYPSPFVRGTGKDKVYLL 81 (294)
Q Consensus 2 ~~lk~ik~RI~sv~~~~KITkaMkmVA~skl~ka~~~~~~~~~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (294)
|||+|||+||+||+||+|||+||||||+|||||+|++++++|||+.....++.+ +.+..+...++.++
T Consensus 1 A~Lkeik~RI~Sv~st~kITkAMkmVAasKlrkaq~~~~~~r~Y~~~~~~~~~~------------~~~~~~~~~~~~l~ 68 (272)
T 2ck3_G 1 ATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVYGVGSLALYEK------------ADIKTPEDKKKHLI 68 (272)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------------------------------CC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC------------CCCCCCCCCCCEEE
T ss_conf 985899999998779899999999999999999999998138668888886525------------34348544685379
Q ss_pred EECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHH
Q ss_conf 31146424420011479999999876532038850388870403798510233320111114776640368899999765
Q gi|254780616|r 82 VICTAEKGLCGGFNAQIIRFARDRIKEFIAEGKEIKLLIIGRKGYEGLRKEFSSMIIDSIELSSKKGVDFVQAHGIARQI 161 (294)
Q Consensus 82 IvitSDrGLCG~~Ns~i~k~~~~~i~~~~~~~~~~~l~~vGkKg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~l 161 (294)
|||||||||||+||++|+|++.+.+++...++.++.++.+|+||.+++.+.+..............++++..+..+...+
T Consensus 69 IvitSDrGLCG~fN~~iik~~~~~i~~~~~~~~~~~~~~~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~ 148 (272)
T 2ck3_G 69 IGVSSDRGLCGAIHSSVAKQMKSEAANLAAAGKEVKIIGVGDKIRSILHRTHSDQFLVTFKEVGRRPPTFGDASVIALEL 148 (272)
T ss_dssp CCBCCSCCCSSSSHHHHC------------------CCCBSHHHHHHC----------CBCSCSSSCCCHHHHHHHHHHC
T ss_pred EEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEEHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHH
T ss_conf 99846987642347789999999998863289569999986016677763067437875224567886188999999999
Q ss_pred HHHHHCCCCCCEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 57650678750588620113443222044204788735422110036554322479967878999998999999999999
Q gi|254780616|r 162 TSLFTSNVFDLCFFIYSEFKSIIQQIPIISKIIPVDWSQDLEQKQQDILSVYRYESTLYSVLDDIVLRSISSRVFWIILE 241 (294)
Q Consensus 162 ~~~~~~~~~d~v~iiYn~f~s~~~q~p~~~~llP~~~~~~~~~~~~~~~~~~~~Ep~~~~il~~l~~~yl~~~l~~alle 241 (294)
...+ +++|+|+|+||+|+|+++|.|+..+++|+++. +.....|.|||+++++|+.|+|.|++++||+|++|
T Consensus 149 ~~~~--~~~d~v~iiyn~f~s~~~q~p~~~~l~p~~~~-------~~~~~~~~~e~~~~~vl~~l~~~yl~~~l~~a~~e 219 (272)
T 2ck3_G 149 LNSG--YEFDEGSIIFNRFRSVISYKTEEKPIFSLDTI-------SSAESMSIYDDIDADVLRNYQEYSLANIIYYSLKE 219 (272)
T ss_dssp ------------CCCCCEECSSSCEECC---------------------------------------HHHHHHHHHHHHH
T ss_pred HHHH--CCCCCEEEEECCCCCCCCCCCEEEECCCCCCC-------CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8744--03661033312454421456425533788765-------42111221122178899989999899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999999999999999989999999999999998988988999998525319
Q gi|254780616|r 242 NKASEVGARITAMDNATRNAGQMVDNLVLSYNRQRQMRITTELIEIIAGAEVV 294 (294)
Q Consensus 242 s~aSE~aaRm~AM~~At~Na~~~i~~L~l~~Nk~RQ~~IT~El~EIisGaeAl 294 (294)
|+||||+|||+|||+|||||+|++++|+++|||+||++||+||+|||||||||
T Consensus 220 s~asE~aaRm~AM~~At~Na~e~i~~L~~~yNr~RQa~IT~El~EIvsGaeAl 272 (272)
T 2ck3_G 220 STTSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAAL 272 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 89999999999999999859999999999999999999999999999888549