PSIBLAST alignment of GI: 254780616 and protein with PDB id: 1mab

>gi|6729936|pdb|1MAB|G Chain G, Rat Liver F1-Atpase Length = 270
 Score =  209 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 80/290 (27%), Positives = 142/290 (48%), Gaps = 21/290 (7%)

Query: 5   KEFKSRIHSVKETQKITEAMQLISVTKLRRAKEAIQNASSYQFHIKDFFMKCVVGEHFQE 64
           ++   R+ S+K  QKIT++M++++  K  RA+  ++ A  Y                   
Sbjct: 1   RDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVYGTG------------SLAL 48

Query: 65  YPSPFVRGTGKDKVYLLVICTAEKGLCGGFNAQIIRFARDRIKEFIAEGKEIKLLIIGRK 124
           Y    ++G    K +L++  ++++GLCG  ++ + +  ++ +    A GKE+ ++ IG K
Sbjct: 49  YEKAEIKGPEDKKKHLIIGVSSDRGLCGAIHSSVAKQMKNDMAALTAAGKEVMIVGIGEK 108

Query: 125 GYEGLRKEFSSMIIDSIELSSKKGVDFVQAHGIARQITSLFTSNVFDLCFFIYSEFKSII 184
               L +  S   + S +   +K   F  A  IA ++  L +   FD    I+++FKS+I
Sbjct: 109 IKSILYRTHSDQFLVSFKDVGRKPPTFGDASVIALEL--LNSGYEFDEGSIIFNQFKSVI 166

Query: 185 QQIPIISKIIPVDWSQDLEQKQQDILSVYRYESTLYSVLDDIVLRSISSRVFWIILENKA 244
                   I         E           Y+     VL +    ++++ +++ + E+  
Sbjct: 167 SYKTEEKPIFSFSTVVAAENMS-------IYDDIDADVLQNYQEYNLANIIYYSLKESTT 219

Query: 245 SEVGARITAMDNATRNAGQMVDNLVLSYNRQRQMRITTELIEIIAGAEVV 294
           SE  AR+TAMDNA++NA  M+D L L++NR RQ  IT ELIEII+GA  +
Sbjct: 220 SEQSARMTAMDNASKNASDMIDKLTLTFNRTRQAVITKELIEIISGAAAL 269