PSIBLAST alignment of GI: 254780616 and protein with PDB id: 1mab
>gi|6729936|pdb|1MAB|G Chain G, Rat Liver F1-Atpase Length = 270
Score = 209 bits (533), Expect = 3e-52, Method: Composition-based stats.
Identities = 80/290 (27%), Positives = 142/290 (48%), Gaps = 21/290 (7%)
Query: 5 KEFKSRIHSVKETQKITEAMQLISVTKLRRAKEAIQNASSYQFHIKDFFMKCVVGEHFQE 64
++ R+ S+K QKIT++M++++ K RA+ ++ A Y
Sbjct: 1 RDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVYGTG------------SLAL 48
Query: 65 YPSPFVRGTGKDKVYLLVICTAEKGLCGGFNAQIIRFARDRIKEFIAEGKEIKLLIIGRK 124
Y ++G K +L++ ++++GLCG ++ + + ++ + A GKE+ ++ IG K
Sbjct: 49 YEKAEIKGPEDKKKHLIIGVSSDRGLCGAIHSSVAKQMKNDMAALTAAGKEVMIVGIGEK 108
Query: 125 GYEGLRKEFSSMIIDSIELSSKKGVDFVQAHGIARQITSLFTSNVFDLCFFIYSEFKSII 184
L + S + S + +K F A IA ++ L + FD I+++FKS+I
Sbjct: 109 IKSILYRTHSDQFLVSFKDVGRKPPTFGDASVIALEL--LNSGYEFDEGSIIFNQFKSVI 166
Query: 185 QQIPIISKIIPVDWSQDLEQKQQDILSVYRYESTLYSVLDDIVLRSISSRVFWIILENKA 244
I E Y+ VL + ++++ +++ + E+
Sbjct: 167 SYKTEEKPIFSFSTVVAAENMS-------IYDDIDADVLQNYQEYNLANIIYYSLKESTT 219
Query: 245 SEVGARITAMDNATRNAGQMVDNLVLSYNRQRQMRITTELIEIIAGAEVV 294
SE AR+TAMDNA++NA M+D L L++NR RQ IT ELIEII+GA +
Sbjct: 220 SEQSARMTAMDNASKNASDMIDKLTLTFNRTRQAVITKELIEIISGAAAL 269