RPSBLAST alignment for GI: 254780616 and conserved domain: TIGR01146

>gnl|CDD|162225 TIGR01146, ATPsyn_F1gamma, ATP synthase, F1 gamma subunit. This model describes the ATP synthase gamma subunit in bacteria and its equivalents in organelles, namely, mitochondria and chloroplast. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involed in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. The gamma subunit is the part of F1 cluster. Surrounding the gamma subunit in a cylinder-like structure are three alpha and three subunits in an alternating fashion. This is the central catalytic unit whose different conformations permit the binding of ADP and inorganic phosphate and release of ATP. Length = 287
 Score =  239 bits (611), Expect = 8e-64
 Identities = 110/292 (37%), Positives = 173/292 (59%), Gaps = 7/292 (2%)

Query: 1   MTSLKEFKSRIHSVKETQKITEAMQLISVTKLRRAKEAIQNASSYQFHIKDFFMKCVVGE 60
           M +LKE ++RI SVK TQKIT+AM++++ +KLRRA+E  + A  Y   I+          
Sbjct: 1   MATLKEIRTRIKSVKNTQKITKAMKMVAASKLRRAQERAEAARPYAEKIRAVLGNLATKL 60

Query: 61  HFQEYPSPFVRGTGKDKVYLLVICTAEKGLCGGFNAQIIRFARDRIKEFIAEGKEIKLLI 120
              ++P      + + K   +++ T+++GLCGG+N+ +++  R R KE  A GKE+KL++
Sbjct: 61  LNYDHPLL---KSREVKKVGILVITSDRGLCGGYNSNVLKRVRQRAKELKAAGKEVKLVV 117

Query: 121 IGRKGYEGLRKEFSSMIIDSIELSSKKGVDFVQAHGIARQITSLFTSNVFDLCFFIYSEF 180
           IGRKG    ++     I+ SI   S +   F +A GIA ++   F S  FD  + +Y++F
Sbjct: 118 IGRKGKSFFKR-RGDNIVLSITGLSDQ-PTFEEASGIADKLLDAFASGEFDEVYIVYNKF 175

Query: 181 KSIIQQIPIISKIIPVDWSQDLEQKQQDILSVYRYESTLYSVLDDIVLRSISSRVFWIIL 240
            S I Q P + +++P+      E  +     ++  +     +LDD++ R + S+++  +L
Sbjct: 176 VSSISQEPTVKQLLPLSEQGPDEGFKFGQDYIFEPDEE--EILDDLLPRYLESQIYGALL 233

Query: 241 ENKASEVGARITAMDNATRNAGQMVDNLVLSYNRQRQMRITTELIEIIAGAE 292
           E+ ASE  AR+TAMDNAT NAG ++  L LSYNR RQ  IT ELIEI+AGA 
Sbjct: 234 ESAASEQAARMTAMDNATDNAGDLIKKLTLSYNRARQAAITQELIEIVAGAS 285