HHsearch alignment for GI: 254780617 and conserved domain: COG1474

>COG1474 CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones].

Probab=95.00  E-value=0.13  Score=30.87  Aligned_cols=99  Identities=15%  Similarity=0.211  Sum_probs=54.5

Q ss_pred             CCCCCCCC---EEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEC---CCCHHHHHHHHHHHCCCCCCCEE
Q ss_conf             11115683---3655247788611589999999886302466787606999951---67767899999851146742115
Q gi|254780617|r  156 LIPIGRGQ---RELIIGDRKTGKTSIILDTFLNQKSSHDKGSEKDKVYCIYVAI---GQKRSSVARFVKALEDRGALSYS  229 (509)
Q Consensus       156 l~pigrGQ---R~~I~g~~g~GKt~l~~~~I~nq~~~~~~~~~~~~v~~V~~~I---Ger~~ev~~~~~~l~~~~~~~~t  229 (509)
T Consensus        33 l~~~~~~~~p~n~~iyG~~GTGKT~~~-~~v~~~l~~~~-----~~~~~~yINc~~~~t~~~i~~~i~~~~~--------   98 (366)
T COG1474          33 LAPALRGERPSNIIIYGPTGTGKTATV-KFVMEELEESS-----ANVEVVYINCLELRTPYQVLSKILNKLG--------   98 (366)
T ss_pred             HHHHHCCCCCCCEEEECCCCCCHHHHH-HHHHHHHHHHC-----CCCCEEEEEEEECCCHHHHHHHHHHHHC--------
T ss_conf             999855899860799889998732899-99999997331-----5675799951307878799999999826--------


Q ss_pred             EEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHH
Q ss_conf             89972887888999998876666667542046884799616478999
Q gi|254780617|r  230 IVVVASASDPAPMQLLAPFAGCAMGEYFRDNGYHALIAYDDLQKHAV  276 (509)
Q Consensus       230 vvv~a~a~~~~~~r~~ap~~a~aiAEyfr~~G~~VLi~~Ddltr~A~  276 (509)
T Consensus        99 --------~~p~~g~~~~~~~~~l~~~~~~~~~~~IvvLDEid~L~~  137 (366)
T COG1474          99 --------KVPLTGDSSLEILKRLYDNLSKKGKTVIVILDEVDALVD  137 (366)
T ss_pred             --------CCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHC
T ss_conf             --------899767632689999999777418759999764765415