HHsearch alignment for GI: 254780617 and conserved domain: KOG4658
>KOG4658 consensus.
Probab=92.89 E-value=0.77 Score=25.18 Aligned_cols=101 Identities=21% Similarity=0.249 Sum_probs=50.6
Q ss_pred HHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHH-HCCCCCCCEEE
Q ss_conf 33101111568336552477886115899999998863024667876069999516776789999985-11467421158
Q gi|254780617|r 152 AIDSLIPIGRGQRELIIGDRKTGKTSIILDTFLNQKSSHDKGSEKDKVYCIYVAIGQKRSSVARFVKA-LEDRGALSYSI 230 (509)
Q Consensus 152 ~ID~l~pigrGQR~~I~g~~g~GKt~l~~~~I~nq~~~~~~~~~~~~v~~V~~~IGer~~ev~~~~~~-l~~~~~~~~tv 230 (509)
T Consensus 170 l~~~L~~d~~-~ivgi~GMGGvGKTTL~~-qi~N~~~~--v~~~Fd~~--iWV~VSk~-f~~~~iq~~Il~~l~~~~~~- 241 (889)
T KOG4658 170 LWNRLMEDDV-GIVGIYGMGGVGKTTLAR-QIFNKFDE--VGNHFDGV--IWVVVSKE-FTTRKIQQTILERLGLLDEE- 241 (889)
T ss_pred HHHHHCCCCC-CEEEEECCCCCCHHHHHH-HHHHCCHH--HCCCCCEE--EEEEECCC-CCHHHHHHHHHHHHCCCCCC-
T ss_conf 9998404799-689998897034999999-98413312--23578749--99997763-10888999999984468710-
Q ss_pred EEEECCCCCHHHHHHHHHHHHHHHHHHHC-CCCCEEEEEECHHH
Q ss_conf 99728878889999988766666675420-46884799616478
Q gi|254780617|r 231 VVVASASDPAPMQLLAPFAGCAMGEYFRD-NGYHALIAYDDLQK 273 (509)
Q Consensus 231 vv~a~a~~~~~~r~~ap~~a~aiAEyfr~-~G~~VLi~~Ddltr 273 (509)
T Consensus 242 -----~~~~~~-~~----~~~---~i~~~L~~krfllvLDDIW~ 272 (889)
T KOG4658 242 -----WEDKEE-DE----LAS---KLLNLLEGKRFLLVLDDIWE 272 (889)
T ss_pred -----CCCCCH-HH----HHH---HHHHHHCCCCEEEEEECCCC
T ss_conf -----001028-89----999---99998556855999825675