HHsearch alignment for GI: 254780617 and conserved domain: PRK09281

>PRK09281 F0F1 ATP synthase subunit alpha; Validated.
Probab=100.00  E-value=0  Score=1254.29  Aligned_cols=501  Identities=66%  Similarity=1.078  Sum_probs=496.9

Q ss_pred             CCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCEEEEECCCCCCCCCEEEECCCEEEEEEEECCCEEEEEEECCCC
Q ss_conf             98888999999999984245554201035899982758999758887737479957981899992059859999805866
Q gi|254780617|r    1 MDIHAAEISDILRKRIKDFGNDSEFSEIGRVLSIGDGIARVYGLNNIRAGEMVQFSHGVYGMALNLEVDNVGVVILGSYK   80 (509)
Q Consensus         1 m~~~~~eis~~l~~~i~~~~~~~~~~~~G~V~~V~~giv~v~GL~~a~~GElv~~~~g~~G~Vi~l~~d~v~i~~l~~~~   80 (509)
T Consensus         1 ~~~~~~ei~~~i~~~i~~~~~~~~~~~~G~V~~v~dgia~v~GL~~~~~~elv~f~~g~~g~~~nle~d~vg~v~lg~~~   80 (502)
T PRK09281          1 MQINPDEISSIIKQQIENFDAEAEVREVGTVLSVGDGIARVYGLDNVMAGELLEFPGGVYGIALNLEEDSVGAVILGDYE   80 (502)
T ss_pred             CCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCEEEEECCCCCCCCCEEEECCCCEEEEEECCCCCEEEEEECCCC
T ss_conf             99888999999999998248877412446999981738999577535648869968998799982478827999946855


Q ss_pred             CCCCCCEEEECCCEEEEECCHHHHHCCCCHHHCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHHCCHHHHHCCCCCC
Q ss_conf             86789888977987886679469830003002314466444544410010135773112660014441602331011115
Q gi|254780617|r   81 EISEGDIVKRTGRIVDVPVGLELLGRVVDALGNPIDGKGPIKCEQRSCTEADAPGIIQRQSVCEPLSTGIKAIDSLIPIG  160 (509)
Q Consensus        81 gI~~G~~V~~tg~~~~vpvG~~lLGRVvD~lG~PlDg~g~i~~~~~~~i~~~~p~~~~R~~i~~~l~TGI~~ID~l~pig  160 (509)
T Consensus        81 ~i~~G~~V~~TG~~~~VPVG~~lLGRVvd~lG~PiDGkgpi~~~~~~pie~~aP~i~~R~~V~epL~TGIkaID~l~PiG  160 (502)
T PRK09281         81 DIKEGDTVKRTGRILEVPVGEALLGRVVNPLGQPIDGKGPINATETRPVERKAPGVIDRKSVHEPLQTGIKAIDAMIPIG  160 (502)
T ss_pred             CCCCCCEEEECCCCEEEECCHHHHCCEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC
T ss_conf             56899989857982577567523033206774526899988886031355889685135776752331135554125656


Q ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCH
Q ss_conf             68336552477886115899999998863024667876069999516776789999985114674211589972887888
Q gi|254780617|r  161 RGQRELIIGDRKTGKTSIILDTFLNQKSSHDKGSEKDKVYCIYVAIGQKRSSVARFVKALEDRGALSYSIVVVASASDPA  240 (509)
Q Consensus       161 rGQR~~I~g~~g~GKt~l~~~~I~nq~~~~~~~~~~~~v~~V~~~IGer~~ev~~~~~~l~~~~~~~~tvvv~a~a~~~~  240 (509)
T Consensus       161 rGQR~lIiGd~gtGKT~iaidtIinqk~--------~~vicVyvaIGer~seV~~~v~~L~~~gal~~TvvV~ata~dpa  232 (502)
T PRK09281        161 RGQRELIIGDRQTGKTAIAIDTIINQKG--------KDVICIYVAIGQKASTVANVVRKLEEHGAMEYTIVVAATASDPA  232 (502)
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHCC--------CCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCH
T ss_conf             8756675247873388999999985325--------88369999851221789999998754486411379971799999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf             99999887666666754204688479961647899999875453037875433375200124678888750454458873
Q gi|254780617|r  241 PMQLLAPFAGCAMGEYFRDNGYHALIAYDDLQKHAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDALGAGS  320 (509)
Q Consensus       241 ~~r~~ap~~a~aiAEyfr~~G~~VLi~~Ddltr~A~a~reisl~~~~pp~~~gyp~~vf~~~s~l~ERa~~~~~~~g~GS  320 (509)
T Consensus       233 ~lr~~Apyaa~aIAEyFrd~G~dVLlv~DdLtr~A~A~REisLll~rPPgreaYPgdVFylhsrLlERa~~l~~~~ggGS  312 (502)
T PRK09281        233 PLQYLAPYAGCAMGEYFMDNGKDALIVYDDLSKQAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSDELGGGS  312 (502)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCE
T ss_conf             99999999999999999967994899985568999999888986279987667894077786799887651478899840


Q ss_pred             EEEEEEEECCCCCCCCCHHHHHHHHHCCEEEEECCHHHHCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             56753100367664431146688540616996150122102665433444122034343898877556788879988767
Q gi|254780617|r  321 LTALPVIETQVNDVSAYIPTNVISITDGQIFLETELFYQGIRPAINIGLSVSRVGSAAQVKAMKQVSGAVKGELAQYREM  400 (509)
Q Consensus       321 iT~~~~v~~~~~D~~~~i~~~~~si~DG~i~l~~~l~~~g~~Paid~~~S~SRv~~~~~~~~~~~~a~~lr~~laqy~El  400 (509)
T Consensus       313 iTalpivet~a~DvsayIptnvisItDGqI~L~~~L~~~G~~PAIdvg~SVSRVG~~aQ~k~~k~vag~lrl~laqy~el  392 (502)
T PRK09281        313 LTALPIIETQAGDVSAYIPTNVISITDGQIFLESDLFNSGIRPAINVGISVSRVGGAAQIKAMKKVAGTLRLDLAQYREL  392 (502)
T ss_pred             EEEEEEEEECCCCCCCCCCCCCEEEECCEEEEEHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             67676666048865565440202341446998642766898750144553334675024499999999999999999999


Q ss_pred             HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             87987633899899999999999999966999887488999999999866980667989999999999999974159999
Q gi|254780617|r  401 SSFSKFSSDLDSSTQKFLSKGERLTELLKQPQFSPLAMEEQVVMIFAGISGCLDEVAVSQVRKFETNFLSHMRVSSQDIL  480 (509)
Q Consensus       401 e~f~~fgsdlD~~t~~~l~rg~ri~e~LkQ~~~~p~~~~~qv~~l~a~~~G~ld~i~v~~I~~fe~~l~~~l~~~~~ei~  480 (509)
T Consensus       393 ~~fa~fgsdld~~t~~~l~rg~r~~e~LkQ~~~~p~~~~~qv~~l~a~~~g~ld~~~~~~v~~~~~~~~~~~~~~~~~~~  472 (502)
T PRK09281        393 EAFAQFGSDLDEATRAQLERGQRLVELLKQPQYSPLPVEEQVVILYAGTNGYLDDVPVEKVRRFEAELLAYLRSNHADLL  472 (502)
T ss_pred             HHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99997535669999999999999999867888999699999999999964986678989999999999999987649999


Q ss_pred             HHHHHCCCCCHHHHHHHHHHHHHHHHHCC
Q ss_conf             98873279898999999999999985159
Q gi|254780617|r  481 EDIRKQKVLTDDIRSKLINEIKVFLEDFN  509 (509)
Q Consensus       481 ~~I~~~~~l~de~~~~L~~~i~~~~~~Fs  509 (509)
T Consensus       473 ~~i~~~~~l~~~~~~~l~~~~~~~~~~f~  501 (502)
T PRK09281        473 EEIRETKKLSDDIEAKLKAAIEEFKKTFA  501 (502)
T ss_pred             HHHHHCCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf             99986489999999999999999985248