HHsearch alignment for GI: 254780617 and conserved domain: PRK13342

>PRK13342 recombination factor protein RarA; Reviewed.

Probab=95.84  E-value=0.041  Score=34.43  Aligned_cols=33  Identities=24%  Similarity=0.364  Sum_probs=22.0

Q ss_pred             HHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHH
Q ss_conf             3101111568336552477886115899999998
Q gi|254780617|r  153 IDSLIPIGRGQRELIIGDRKTGKTSIILDTFLNQ  186 (509)
Q Consensus       153 ID~l~pigrGQR~~I~g~~g~GKt~l~~~~I~nq  186 (509)
T Consensus        28 L~~~i~~~~~~s~Il~GPPG~GKTTlA~-iiA~~   60 (417)
T PRK13342         28 LRRMIEAGRLSSMILWGPPGTGKTTLAR-IIAGA   60 (417)
T ss_pred             HHHHHHCCCCCEEEEECCCCCCHHHHHH-HHHHH
T ss_conf             9999976999759988969998999999-99998