HHsearch alignment for GI: 254780617 and conserved domain: TIGR01846
>TIGR01846 type_I_sec_HlyB type I secretion system ATPase; InterPro: IPR010132 Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This entry contains one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N terminus, but rather carry signals located toward the extreme C terminus to direct type I secretion.; GO: 0005524 ATP binding, 0008565 protein transporter activity, 0015031 protein transport, 0016021 integral to membrane.
Probab=91.12 E-value=0.15 Score=30.39 Aligned_cols=27 Identities=22% Similarity=0.340 Sum_probs=22.5
Q ss_pred HCCCCCCCCCEEEEECCCCCCCHHHHH
Q ss_conf 101111568336552477886115899
Q gi|254780617|r 154 DSLIPIGRGQRELIIGDRKTGKTSIIL 180 (509)
Q Consensus 154 D~l~pigrGQR~~I~g~~g~GKt~l~~ 180 (509)
T Consensus 483 nl~L~I~~Ge~IGIvGpSGSGKSTLTK 509 (703)
T TIGR01846 483 NLSLDIKPGEVIGIVGPSGSGKSTLTK 509 (703)
T ss_pred CCCCCCCCCEEEEEECCCCCCHHHHHH
T ss_conf 268765786579987278986789999