HHsearch alignment for GI: 254780617 and conserved domain: TIGR02746
>TIGR02746 TraC-F-type type-IV secretion system protein TraC; InterPro: IPR014117 The proteins in this entry are found in the F, P and I-like type IV secretion systems. Gene symbols include TraC (F-type), TrbE/VirB4 (P-type) and TraU (I-type). The proteins contain the Walker A and B motifs and so are putative nucleotide triphosphatases..
Probab=91.57 E-value=0.32 Score=27.90 Aligned_cols=61 Identities=16% Similarity=0.229 Sum_probs=41.2
Q ss_pred HHHHHCCCCCC---CCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHC
Q ss_conf 02331011115---6833655247788611589999999886302466787606999951677678999998511
Q gi|254780617|r 150 IKAIDSLIPIG---RGQRELIIGDRKTGKTSIILDTFLNQKSSHDKGSEKDKVYCIYVAIGQKRSSVARFVKALE 221 (509)
Q Consensus 150 I~~ID~l~pig---rGQR~~I~g~~g~GKt~l~~~~I~nq~~~~~~~~~~~~v~~V~~~IGer~~ev~~~~~~l~ 221 (509)
T Consensus 474 l~~~d~F~~~~~~i~NYN~~~~g~sG~GKSf~~Q~~~~~~L~~G~k---------v~vi--DvG~Sy~KLC~~lg 537 (900)
T TIGR02746 474 LSAFDPFDSDLLNITNYNIAVVGGSGAGKSFFMQELIVSVLSRGGK---------VWVI--DVGRSYKKLCEMLG 537 (900)
T ss_pred EEEEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCE---------EEEE--EECCCHHHHHHHHC
T ss_conf 8778303378667677148997288987168798999998517984---------8999--60788488876518