HHsearch alignment for GI: 254780617 and conserved domain: TIGR03015

>TIGR03015 pepcterm_ATPase putative secretion ATPase, PEP-CTERM locus subfamily. Members of this protein are marked as probable ATPases by the nucleotide binding P-loop motif GXXGXGKTT, a motif DEAQ similar to the DEAD/H box of helicases, and extensive homology to ATPases of MSHA-type pilus systems and to GspA proteins associated with type II protein secretion systems.
Probab=92.01  E-value=0.98  Score=24.42  Aligned_cols=124  Identities=15%  Similarity=0.231  Sum_probs=56.1

Q ss_pred             EEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHH
Q ss_conf             36552477886115899999998863024667876069999516776789999985114674211589972887888999
Q gi|254780617|r  164 RELIIGDRKTGKTSIILDTFLNQKSSHDKGSEKDKVYCIYVAIGQKRSSVARFVKALEDRGALSYSIVVVASASDPAPMQ  243 (509)
Q Consensus       164 R~~I~g~~g~GKt~l~~~~I~nq~~~~~~~~~~~~v~~V~~~IGer~~ev~~~~~~l~~~~~~~~tvvv~a~a~~~~~~r  243 (509)
T Consensus        45 ~~lltGe~GtGKTtllr~l~-~~l-------~~~~~~~~~i~-~-~~l~~~~ll~~i~~~lg~~-----~~~~~~~~~~~  109 (269)
T TIGR03015        45 FILITGEVGAGKTTLIRNLL-KRL-------DQERVVAAKLV-N-TRVDAEDLLRMVAADFGLE-----TEGRDKAALLR  109 (269)
T ss_pred             EEEEECCCCCCHHHHHHHHH-HHC-------CCCCEEEEEEC-C-CCCCHHHHHHHHHHHCCCC-----CCCCCHHHHHH
T ss_conf             59997299898899999999-845-------93454899976-9-9999999999999985989-----88989999999


Q ss_pred             HHHHHHHHHHHHHH---HCCCCCEEEEEECHHHHH-HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             99887666666754---204688479961647899-99987545303787543337520012467888875
Q gi|254780617|r  244 LLAPFAGCAMGEYF---RDNGYHALIAYDDLQKHA-VAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAA  310 (509)
Q Consensus       244 ~~ap~~a~aiAEyf---r~~G~~VLi~~Ddltr~A-~a~reisl~~~~pp~~~gyp~~vf~~~s~l~ERa~  310 (509)
T Consensus       110 --------~l~~~L~~~~~~g~~~vliIDEAq~L~~~~Le~Lr~L~n~e~~~~~ll~iiL~GqpeL~~~L~  172 (269)
T TIGR03015       110 --------ELEDFLIEQFAAGKRALLVVDEAQNLTPELLEELRMLSNFQTDNAKLLQIFLVGQPEFRETLQ  172 (269)
T ss_pred             --------HHHHHHHHHHHCCCCEEEEEECHHHCCHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHC
T ss_conf             --------999999999966994699972422199999999999970135888704899957867999872