HHsearch alignment for GI: 254780617 and conserved domain: cd01122
>cd01122 GP4d_helicase GP4d_helicase is a homohexameric 5'-3' helicases. Helicases couple NTP hydrolysis to the unwinding of nucleic acid duplexes into their component strands.
Probab=91.79 E-value=0.72 Score=25.37 Aligned_cols=65 Identities=17% Similarity=0.246 Sum_probs=42.5
Q ss_pred HHHHCCHHHHHCCCC-CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHH
Q ss_conf 144416023310111-156833655247788611589999999886302466787606999951677678999
Q gi|254780617|r 144 EPLSTGIKAIDSLIP-IGRGQRELIIGDRKTGKTSIILDTFLNQKSSHDKGSEKDKVYCIYVAIGQKRSSVAR 215 (509)
Q Consensus 144 ~~l~TGI~~ID~l~p-igrGQR~~I~g~~g~GKt~l~~~~I~nq~~~~~~~~~~~~v~~V~~~IGer~~ev~~ 215 (509)
T Consensus 11 ~~~~~pf~~LD~~~~Gl~~GeL~viaarpg~GKT~f~~~~a~~~~~~~g-------~~vl~~SlEm~~~~~~~ 76 (271)
T cd01122 11 EEVWWPFPVLNKLTKGLRKGELIILTAGTGVGKTTFLREYALDLITQHG-------VRVGTISLEEPVVRTAR 76 (271)
T ss_pred CCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCC-------CEEEEEECCCCHHHHHH
T ss_conf 5665881668887379999808999968998699999999999999769-------90899970499999999