HHsearch alignment for GI: 254780617 and conserved domain: cd03223
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=93.07 E-value=0.063 Score=33.06 Aligned_cols=29 Identities=38% Similarity=0.535 Sum_probs=24.2
Q ss_pred HCCCCCCCCCEEEEECCCCCCCHHHHHHHH
Q ss_conf 101111568336552477886115899999
Q gi|254780617|r 154 DSLIPIGRGQRELIIGDRKTGKTSIILDTF 183 (509)
Q Consensus 154 D~l~pigrGQR~~I~g~~g~GKt~l~~~~I 183 (509)
T Consensus 19 ~isl~i~~Ge~v~i~G~sGsGKSTLl-~~l 47 (166)
T cd03223 19 DLSFEIKPGDRLLITGPSGTGKSSLF-RAL 47 (166)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHH-HHH
T ss_conf 45889889999999958999889999-998