HHsearch alignment for GI: 254780617 and conserved domain: cd03231
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=90.96 E-value=0.19 Score=29.56 Aligned_cols=31 Identities=16% Similarity=0.325 Sum_probs=24.9
Q ss_pred CCCCCCCCCEEEEECCCCCCCHHHHHHHHHHH
Q ss_conf 01111568336552477886115899999998
Q gi|254780617|r 155 SLIPIGRGQRELIIGDRKTGKTSIILDTFLNQ 186 (509)
Q Consensus 155 ~l~pigrGQR~~I~g~~g~GKt~l~~~~I~nq 186 (509)
T Consensus 19 vs~~i~~Ge~~~l~G~NGsGKSTLl-k~i~Gl 49 (201)
T cd03231 19 LSFTLAAGEALQVTGPNGSGKTTLL-RILAGL 49 (201)
T ss_pred CEEEECCCCEEEEECCCCCCHHHHH-HHHHCC
T ss_conf 0788879959999999999999999-999667