HHsearch alignment for GI: 254780617 and conserved domain: cd03249
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=92.58 E-value=0.083 Score=32.20 Aligned_cols=30 Identities=17% Similarity=0.376 Sum_probs=24.6
Q ss_pred HCCCCCCCCCEEEEECCCCCCCHHHHHHHHH
Q ss_conf 1011115683365524778861158999999
Q gi|254780617|r 154 DSLIPIGRGQRELIIGDRKTGKTSIILDTFL 184 (509)
Q Consensus 154 D~l~pigrGQR~~I~g~~g~GKt~l~~~~I~ 184 (509)
T Consensus 21 ~isl~i~~G~~iaIvG~sGsGKSTLl-~ll~ 50 (238)
T cd03249 21 GLSLTIPPGKTVALVGSSGCGKSTVV-SLLE 50 (238)
T ss_pred CEEEEECCCCEEEEECCCCCCHHHHH-HHHH
T ss_conf 55899769999999999999899999-9982