HHsearch alignment for GI: 254780617 and conserved domain: cd03261
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=91.67 E-value=0.12 Score=31.10 Aligned_cols=32 Identities=22% Similarity=0.411 Sum_probs=25.1
Q ss_pred HHHH-CCCCCCCCCEEEEECCCCCCCHHHHHHHH
Q ss_conf 2331-01111568336552477886115899999
Q gi|254780617|r 151 KAID-SLIPIGRGQRELIIGDRKTGKTSIILDTF 183 (509)
Q Consensus 151 ~~ID-~l~pigrGQR~~I~g~~g~GKt~l~~~~I 183 (509)
T Consensus 14 ~~L~~isl~i~~Ge~~~iiG~SGsGKSTll~-~i 46 (235)
T cd03261 14 TVLKGVDLDVRRGEILAIIGPSGSGKSTLLR-LI 46 (235)
T ss_pred EEECCEEEEECCCCEEEEECCCCCHHHHHHH-HH
T ss_conf 8882606488799899999999972999999-99