HHsearch alignment for GI: 254780617 and conserved domain: cd03293

>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=91.63  E-value=0.11  Score=31.25  Aligned_cols=33  Identities=15%  Similarity=0.441  Sum_probs=26.4

Q ss_pred             HHHHH-CCCCCCCCCEEEEECCCCCCCHHHHHHHH
Q ss_conf             02331-01111568336552477886115899999
Q gi|254780617|r  150 IKAID-SLIPIGRGQRELIIGDRKTGKTSIILDTF  183 (509)
Q Consensus       150 I~~ID-~l~pigrGQR~~I~g~~g~GKt~l~~~~I  183 (509)
T Consensus        17 ~~al~~vsl~i~~Ge~~~iiGpsGsGKSTLl-~~i   50 (220)
T cd03293          17 VTALEDISLSVEEGEFVALVGPSGCGKSTLL-RII   50 (220)
T ss_pred             EEEEECEEEEECCCCEEEEECCCCCHHHHHH-HHH
T ss_conf             9999671889879989999999995799999-999