HHsearch alignment for GI: 254780617 and conserved domain: cd03296
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=90.37 E-value=0.18 Score=29.80 Aligned_cols=34 Identities=24% Similarity=0.432 Sum_probs=26.4
Q ss_pred CHHHHH-CCCCCCCCCEEEEECCCCCCCHHHHHHHH
Q ss_conf 602331-01111568336552477886115899999
Q gi|254780617|r 149 GIKAID-SLIPIGRGQRELIIGDRKTGKTSIILDTF 183 (509)
Q Consensus 149 GI~~ID-~l~pigrGQR~~I~g~~g~GKt~l~~~~I 183 (509)
T Consensus 14 ~~~~l~~is~~v~~Ge~~~iiGpSGsGKSTll-~~i 48 (239)
T cd03296 14 DFVALDDVSLDIPSGELVALLGPSGSGKTTLL-RLI 48 (239)
T ss_pred CEEEECCCEEEECCCCEEEEECCCCCHHHHHH-HHH
T ss_conf 98998663869889989999999997799999-999