HHsearch alignment for GI: 254780617 and conserved domain: cd03299
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=90.69 E-value=0.16 Score=30.13 Aligned_cols=30 Identities=23% Similarity=0.510 Sum_probs=24.4
Q ss_pred HCCCCCCCCCEEEEECCCCCCCHHHHHHHHH
Q ss_conf 1011115683365524778861158999999
Q gi|254780617|r 154 DSLIPIGRGQRELIIGDRKTGKTSIILDTFL 184 (509)
Q Consensus 154 D~l~pigrGQR~~I~g~~g~GKt~l~~~~I~ 184 (509)
T Consensus 17 ~vs~~v~~Ge~~~iiGpSGsGKSTLl-r~i~ 46 (235)
T cd03299 17 NVSLEVERGDYFVILGPTGSGKSVLL-ETIA 46 (235)
T ss_pred CCEEEECCCCEEEEECCCCCHHHHHH-HHHH
T ss_conf 14879889989999999963599999-9997