HHsearch alignment for GI: 254780617 and conserved domain: pfam00006

>pfam00006 ATP-synt_ab ATP synthase alpha/beta family, nucleotide-binding domain. This family includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho.
Probab=100.00  E-value=0  Score=543.06  Aligned_cols=213  Identities=49%  Similarity=0.753  Sum_probs=207.3

Q ss_pred             CCHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCC
Q ss_conf             16023310111156833655247788611589999999886302466787606999951677678999998511467421
Q gi|254780617|r  148 TGIKAIDSLIPIGRGQRELIIGDRKTGKTSIILDTFLNQKSSHDKGSEKDKVYCIYVAIGQKRSSVARFVKALEDRGALS  227 (509)
Q Consensus       148 TGI~~ID~l~pigrGQR~~I~g~~g~GKt~l~~~~I~nq~~~~~~~~~~~~v~~V~~~IGer~~ev~~~~~~l~~~~~~~  227 (509)
T Consensus         1 TGi~~ID~l~pig~GQr~~I~g~~g~GKt~l~~~i~~~~~~---------~~~~V~~~iGer~~ev~~~~~~~~~~~~~~   71 (213)
T pfam00006         1 TGIRAIDLLLPIGKGQRIGIFGGSGTGKTVLLGMIARNAKA---------DVVEVYVLIGERGREVAEFIEELLGEGALK   71 (213)
T ss_pred             CCCCEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH---------CCCEEEEECCCCHHHHHHHHHHHHCCCCCC
T ss_conf             98400020166457888778789999889999999985661---------893599813777799999999752137665


Q ss_pred             EEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             15899728878889999988766666675420468847996164789999987545303787543337520012467888
Q gi|254780617|r  228 YSIVVVASASDPAPMQLLAPFAGCAMGEYFRDNGYHALIAYDDLQKHAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLE  307 (509)
Q Consensus       228 ~tvvv~a~a~~~~~~r~~ap~~a~aiAEyfr~~G~~VLi~~Ddltr~A~a~reisl~~~~pp~~~gyp~~vf~~~s~l~E  307 (509)
T Consensus        72 ~t~vv~~~~d~~~~~r~~~~~~a~~~AEyf~~~G~dVlvi~Dsltr~A~A~reis~~~g~~p~~~gyp~~~~~~~~~l~E  151 (213)
T pfam00006        72 RTVVVAATSDEPPAERYLAPYTALTIAEYFRDQGKDVLLLLDSLTRFARALREISLLLGEPPGREGYPGSLFSDLARLLE  151 (213)
T ss_pred             CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf             06999846889878999999999999999997699689983780599999876500147998545639178888799998


Q ss_pred             HHHHCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCEEEEECCHHHHCCCCCCCCCCCHH
Q ss_conf             87504544588735675310036766443114668854061699615012210266543344412
Q gi|254780617|r  308 RAAKMSDALGAGSLTALPVIETQVNDVSAYIPTNVISITDGQIFLETELFYQGIRPAINIGLSVS  372 (509)
Q Consensus       308 Ra~~~~~~~g~GSiT~~~~v~~~~~D~~~~i~~~~~si~DG~i~l~~~l~~~g~~Paid~~~S~S  372 (509)
T Consensus       152 Rag~~~---~~GSiT~l~tv~~~~~d~~dpi~~~~~~~~dg~ivLsr~la~~g~~PAId~~~S~S  213 (213)
T pfam00006       152 RAGKVE---GGGSITALPTVLVPGGDITDPIPDNTISITDGQIVLSRELAERGIYPAIDILLSVS  213 (213)
T ss_pred             HHHCCC---CCCCEEEEEEEEECCCCCCCCHHHHHHHHCCEEEEECHHHHHCCCCCCCCCCCCCC
T ss_conf             753468---88634788899804888675156765211355999968999679999728755789