HHsearch alignment for GI: 254780617 and conserved domain: pfam08423

>pfam08423 Rad51 Rad51. Rad51 is a DNA repair and recombination protein and is a homologue of the bacterial ATPase RecA protein.
Probab=96.55  E-value=0.0073  Score=39.84  Aligned_cols=132  Identities=17%  Similarity=0.198  Sum_probs=71.1

Q ss_pred             CCCCCCCHHHHHCCHHHHHCCCC--CCCCCEEEEECCCCCCCHHHHHHHHHHH-HHHCCCCCCCCCCEEEEEEC--CCCH
Q ss_conf             31126600144416023310111--1568336552477886115899999998-86302466787606999951--6776
Q gi|254780617|r  136 IIQRQSVCEPLSTGIKAIDSLIP--IGRGQRELIIGDRKTGKTSIILDTFLNQ-KSSHDKGSEKDKVYCIYVAI--GQKR  210 (509)
Q Consensus       136 ~~~R~~i~~~l~TGI~~ID~l~p--igrGQR~~I~g~~g~GKt~l~~~~I~nq-~~~~~~~~~~~~v~~V~~~I--Ger~  210 (509)
T Consensus        15 ~~~~r~~~~~isTg~~~LD~lLgGGi~~g~ITEi~G~~gsGKTQlc~qlav~~qlp~~~gg-~~--g~vvyIDTEg~f~~   91 (261)
T pfam08423        15 LHQRRSEVIRITTGSKELDKLLGGGIETGSITEVFGEFRTGKTQLCHTLCVTCQLPLEMGG-GE--GKALYIDTEGTFRP   91 (261)
T ss_pred             HHHHHCCCCEECCCCHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCHHHHCC-CC--CEEEEEECCCCCCH
T ss_conf             9997548735778987899873798667729999899888789999999999407096569-99--72899936888698


Q ss_pred             HHHHHHHHHHC--CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHH
Q ss_conf             78999998511--46742115899728878889999988766666675420468847996164789999
Q gi|254780617|r  211 SSVARFVKALE--DRGALSYSIVVVASASDPAPMQLLAPFAGCAMGEYFRDNGYHALIAYDDLQKHAVA  277 (509)
Q Consensus       211 ~ev~~~~~~l~--~~~~~~~tvvv~a~a~~~~~~r~~ap~~a~aiAEyfr~~G~~VLi~~Ddltr~A~a  277 (509)
T Consensus        92 eRl~qia~~~~~~~~~~L~~I~v-~r~-~~~-~~~~~~l---~~~~~~~-~~~~v~LvVvDSiaalfR~  153 (261)
T pfam08423        92 ERIVAIAERFGLDPEEVLDNIAY-ARA-YNT-EHQMQLL---LQAAAMM-SESRFALLIVDSATALYRT  153 (261)
T ss_pred             HHHHHHHHHHCCCHHHHHHHCEE-CCC-CCH-HHHHHHH---HHHHHHH-HCCCCEEEEEECCCEEEEE
T ss_conf             99999999829997898753314-168-998-9999999---9999987-3178349998324002333