RPSBLAST alignment for GI: 254780617 and conserved domain: PRK05922

>gnl|CDD|102061 PRK05922, PRK05922, type III secretion system ATPase; Validated. Length = 434
 Score =  112 bits (281), Expect = 2e-25
 Identities = 82/284 (28%), Positives = 132/284 (46%), Gaps = 22/284 (7%)

Query: 93  RIVDVPVGLELLGRVVDALGNPIDGKGPIKCEQRSCTEADAPGIIQRQSVCEPLSTGIKA 152
           R   + +   LLGRV+D  GNP+DGK  +         +  P  + RQ + E   TGIKA
Sbjct: 88  RPPSLHLSDHLLGRVLDGFGNPLDGKEQLPKTHLKPLFSSPPSPMSRQPIQEIFPTGIKA 147

Query: 153 IDSLIPIGRGQRELIIGDRKTGKTSIILDTFLNQKSSHDKGSEKDKVYCIYVAIGQKRSS 212
           ID+ + +G+GQR  +  +  +GK+S++        S+  KGS+      +   IG++   
Sbjct: 148 IDAFLTLGKGQRIGVFSEPGSGKSSLL--------STIAKGSK--STINVIALIGERGRE 197

Query: 213 VARFVKALEDRGALSYSIVVVASASDPAPMQLLAPFAGCAMGEYFRDNGYHALIAYDDLQ 272
           V  +++  ++  A   +I++ + A + AP +++A  A   + EYFRD G+  L   D L 
Sbjct: 198 VREYIEQHKEGLAAQRTIIIASPAHETAPTKVIAGRAAMTIAEYFRDQGHRVLFIMDSLS 257

Query: 273 KHAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDALGAGSLTALPVIETQVN 332
           +   A ++++L          Y   VF+  S   ERA         GS+TAL  I    N
Sbjct: 258 RWIAALQEVALARGETLSAHHYAASVFHHVSEFTERAGNND----KGSITALYAILHYPN 313

Query: 333 DVSAYIPTNVISITDGQIFL---ETELFYQGIRPAINIGLSVSR 373
               +    + S+ DG  FL      L      P I+I  S+SR
Sbjct: 314 HPDIFTDY-LKSLLDGHFFLTPQGKALA----SPPIDILTSLSR 352