RPSBLAST alignment for GI: 254780617 and conserved domain: TIGR02546

>gnl|CDD|162913 TIGR02546, III_secr_ATP, type III secretion apparatus H+-transporting two-sector ATPase. Length = 422
 Score =  197 bits (503), Expect = 5e-51
 Identities = 127/422 (30%), Positives = 192/422 (45%), Gaps = 26/422 (6%)

Query: 29  GRVLSIGDGIARVYGLNNIRAGEMVQFSHGVYGMALNLEV-----DNVGVVILGSYKEIS 83
           GRV  +   + +       R GE+           L  EV     D   +  LG    IS
Sbjct: 7   GRVTEVSGTLLKAVLPG-ARVGELCLIRRRDPS-QLLAEVVGFTGDEALLSPLGELHGIS 64

Query: 84  EGDIVKRTGRIVDVPVGLELLGRVVDALGNPIDGKGPIKCEQRSCTE--ADAPGIIQRQS 141
            G  V  TGR + + VG  LLGRV+D  G P+DGKG +   +       AD P  + RQ 
Sbjct: 65  PGSEVIPTGRPLSIRVGEALLGRVLDGFGRPLDGKGELPAGEIETRPLDADPPPPMSRQP 124

Query: 142 VCEPLSTGIKAIDSLIPIGRGQRELIIGDRKTGKTSIILDTFLNQKSSHDKGSEKDKVYC 201
           + +PL TG++AID L+  G GQR  I      GK++++            +G+  D    
Sbjct: 125 IDQPLPTGVRAIDGLLTCGEGQRIGIFAGAGVGKSTLL--------GMIARGASAD--VN 174

Query: 202 IYVAIGQKRSSVARFVKALEDRGALSYSIVVVASASDPAPMQLLAPFAGCAMGEYFRDNG 261
           +   IG++   V  F++          S++VV+++  P+  +L A +   A+ EYFRD G
Sbjct: 175 VIALIGERGREVREFIEHHLGEEGRKRSVLVVSTSDRPSLERLKAAYTATAIAEYFRDQG 234

Query: 262 YHALIAYDDLQKHAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDALGAGSL 321
              L+  D L + A A R++ L    PP R  YP  VF    RLLERA    +    GS+
Sbjct: 235 KRVLLMMDSLTRFARALREIGLAAGEPPARGGYPPSVFSSLPRLLERAG-NGE---KGSI 290

Query: 322 TALPVIETQVNDVSAYIPTNVISITDGQIFLETELFYQGIRPAINIGLSVSRVGSAAQVK 381
           TAL  +  + +D++  I   V SI DG I L   L  +   PAI++  S+SRV S     
Sbjct: 291 TALYTVLVEGDDMNDPIADEVRSILDGHIVLSRALAERNHYPAIDVLASLSRVMSQVVST 350

Query: 382 AMKQVSGAVKGELAQYREMSSFSK---FSSDLDSSTQKFLSKGERLTELLKQPQFSPLAM 438
             ++ +G ++  LA Y+E+    +   +    D  T   + K + +   L+Q        
Sbjct: 351 EHRRAAGKLRRLLATYKEVELLIRLGEYQPGSDPETDDAIDKIDAIRAFLRQSTDEYSPY 410

Query: 439 EE 440
           EE
Sbjct: 411 EE 412