RPSBLAST alignment for GI: 254780617 and conserved domain: TIGR02546
>gnl|CDD|162913 TIGR02546, III_secr_ATP, type III secretion apparatus H+-transporting two-sector ATPase. Length = 422
Score = 197 bits (503), Expect = 5e-51
Identities = 127/422 (30%), Positives = 192/422 (45%), Gaps = 26/422 (6%)
Query: 29 GRVLSIGDGIARVYGLNNIRAGEMVQFSHGVYGMALNLEV-----DNVGVVILGSYKEIS 83
GRV + + + R GE+ L EV D + LG IS
Sbjct: 7 GRVTEVSGTLLKAVLPG-ARVGELCLIRRRDPS-QLLAEVVGFTGDEALLSPLGELHGIS 64
Query: 84 EGDIVKRTGRIVDVPVGLELLGRVVDALGNPIDGKGPIKCEQRSCTE--ADAPGIIQRQS 141
G V TGR + + VG LLGRV+D G P+DGKG + + AD P + RQ
Sbjct: 65 PGSEVIPTGRPLSIRVGEALLGRVLDGFGRPLDGKGELPAGEIETRPLDADPPPPMSRQP 124
Query: 142 VCEPLSTGIKAIDSLIPIGRGQRELIIGDRKTGKTSIILDTFLNQKSSHDKGSEKDKVYC 201
+ +PL TG++AID L+ G GQR I GK++++ +G+ D
Sbjct: 125 IDQPLPTGVRAIDGLLTCGEGQRIGIFAGAGVGKSTLL--------GMIARGASAD--VN 174
Query: 202 IYVAIGQKRSSVARFVKALEDRGALSYSIVVVASASDPAPMQLLAPFAGCAMGEYFRDNG 261
+ IG++ V F++ S++VV+++ P+ +L A + A+ EYFRD G
Sbjct: 175 VIALIGERGREVREFIEHHLGEEGRKRSVLVVSTSDRPSLERLKAAYTATAIAEYFRDQG 234
Query: 262 YHALIAYDDLQKHAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDALGAGSL 321
L+ D L + A A R++ L PP R YP VF RLLERA + GS+
Sbjct: 235 KRVLLMMDSLTRFARALREIGLAAGEPPARGGYPPSVFSSLPRLLERAG-NGE---KGSI 290
Query: 322 TALPVIETQVNDVSAYIPTNVISITDGQIFLETELFYQGIRPAINIGLSVSRVGSAAQVK 381
TAL + + +D++ I V SI DG I L L + PAI++ S+SRV S
Sbjct: 291 TALYTVLVEGDDMNDPIADEVRSILDGHIVLSRALAERNHYPAIDVLASLSRVMSQVVST 350
Query: 382 AMKQVSGAVKGELAQYREMSSFSK---FSSDLDSSTQKFLSKGERLTELLKQPQFSPLAM 438
++ +G ++ LA Y+E+ + + D T + K + + L+Q
Sbjct: 351 EHRRAAGKLRRLLATYKEVELLIRLGEYQPGSDPETDDAIDKIDAIRAFLRQSTDEYSPY 410
Query: 439 EE 440
EE
Sbjct: 411 EE 412