RPSBLAST alignment for GI: 254780617 and conserved domain: TIGR03496
>gnl|CDD|163292 TIGR03496, FliI_clade1, flagellar protein export ATPase FliI. Members of this protein family are the FliI protein of bacterial flagellum systems. This protein acts to drive protein export for flagellar biosynthesis. The most closely related family is the YscN family of bacterial type III secretion systems. This model represents one (of three) segment of the FliI family tree. These have been modeled separately in order to exclude the type III secretion ATPases more effectively. Length = 411
Score = 181 bits (461), Expect = 5e-46
Identities = 129/421 (30%), Positives = 199/421 (47%), Gaps = 24/421 (5%)
Query: 29 GRVLSIGDGIARVYGLNNIRAGEM--VQFSHG--VYGMALNLEVDNVGVVILGSYKEISE 84
GRV + + GL G ++ S G + + D V ++ L + +
Sbjct: 1 GRVTRVVGLVLEAVGLR-APVGSRCEIESSDGDPIEAEVVGFRGDRVLLMPLEDVEGLRP 59
Query: 85 GDIVKRTGRIVDVPVGLELLGRVVDALGNPIDGKGPIKCEQRSCTEADAPGIIQRQSVCE 144
G V + +PVG LLGRV+D LG P+DGKGP+ +R A ++R + E
Sbjct: 60 GARVFPLEGPLRLPVGDSLLGRVIDGLGRPLDGKGPLDAGERVPLYAPPINPLKRAPIDE 119
Query: 145 PLSTGIKAIDSLIPIGRGQRELIIGDRKTGKTSIILDTFLNQKSSHDKGSEKDKVYCIYV 204
PL G++AI+ L+ +GRGQR I GK S +L + +E D + V
Sbjct: 120 PLDVGVRAINGLLTVGRGQRMGIFAGSGVGK-STLL-------GMMARYTEAD---VVVV 168
Query: 205 A-IGQKRSSVARFV-KALEDRGALSYSIVVVASASDPAPMQLLAPFAGCAMGEYFRDNGY 262
IG++ V F+ L + G L+ S+VV A+A + M+L A F A+ EYFRD G
Sbjct: 169 GLIGERGREVKEFIEDILGEEG-LARSVVVAATADESPLMRLRAAFYATAIAEYFRDQGK 227
Query: 263 HALIAYDDLQKHAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDALGAGSLT 322
L+ D L + A+A R+++L + PP + YP VF +L+ERA + G GS+T
Sbjct: 228 DVLLLMDSLTRFAMAQREIALAIGEPPATKGYPPSVFAKLPQLVERAGNGEE--GKGSIT 285
Query: 323 ALPVIETQVNDVSAYIPTNVISITDGQIFLETELFYQGIRPAINIGLSVSRVGSAAQVKA 382
A + + +D I +I DG I L EL QG PAI+I S+SRV
Sbjct: 286 AFYTVLVEGDDQQDPIADAARAILDGHIVLSRELAEQGHYPAIDILASISRVMPDVVSPE 345
Query: 383 MKQVSGAVKGELAQY---REMSSFSKFSSDLDSSTQKFLSKGERLTELLKQPQFSPLAME 439
+Q + K L++Y R++ S + + D + ++ R+ L+Q + E
Sbjct: 346 HRQAARRFKQLLSRYQENRDLISIGAYQAGSDPELDQAIALYPRIEAFLQQGMRERASFE 405
Query: 440 E 440
E
Sbjct: 406 E 406