RPSBLAST alignment for GI: 254780617 and conserved domain: TIGR03498
>gnl|CDD|163293 TIGR03498, FliI_clade3, flagellar protein export ATPase FliI. Members of this protein family are the FliI protein of bacterial flagellum systems. This protein acts to drive protein export for flagellar biosynthesis. The most closely related family is the YscN family of bacterial type III secretion systems. This model represents one (of three) segment of the FliI family tree. These have been modeled separately in order to exclude the type III secretion ATPases more effectively. Length = 418
Score = 165 bits (419), Expect = 3e-41
Identities = 113/380 (29%), Positives = 181/380 (47%), Gaps = 22/380 (5%)
Query: 29 GRVLSIGDGIARVYGLN-NIRAGEMVQFSHG----VYGMALNLEVDNVGVVILGSYKEIS 83
GRV ++ + V GL+ +R G+ V + D V ++ + +
Sbjct: 1 GRVTAVTGLLIEVRGLSRAVRLGDRCAIRARDGRPVLAEVVGFNGDRVLLMPFEPLEGVG 60
Query: 84 EGDIVKRTGRIVDVPVGLELLGRVVDALGNPIDGKGPIKC-EQRSCTEADAPGIIQRQSV 142
G V + V LGRV++ALG PIDGKGP+ E+R A P + R V
Sbjct: 61 LGCAVFAREGPLAVRPHPSWLGRVINALGEPIDGKGPLPQGERRYPLRASPPPAMSRARV 120
Query: 143 CEPLSTGIKAIDSLIPIGRGQRELIIGDRKTGKTSIILDTFLNQKSSHDKGSEKDKVYCI 202
EPL TG++ ID+ +P+ RGQR I GK++++ S + ++ D V +
Sbjct: 121 GEPLDTGVRVIDTFLPLCRGQRLGIFAGSGVGKSTLL--------SMLARNTDADVV--V 170
Query: 203 YVAIGQKRSSVARFVKALEDRGA--LSYSIVVVASASDPAPMQLLAPFAGCAMGEYFRDN 260
+G++ V F++ +D G L S+VVVA++ + M+ A + A+ EYFRD
Sbjct: 171 IALVGERGREVREFLE--DDLGEEGLKRSVVVVATSDESPLMRRQAAYTATAIAEYFRDQ 228
Query: 261 GYHALIAYDDLQKHAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDALGAGS 320
G L+ D + + A+A R++ L PP Y VF RLLERA ++ G GS
Sbjct: 229 GKDVLLLMDSVTRFAMAQREIGLAAGEPPVARGYTPSVFSELPRLLERAGPGAE--GKGS 286
Query: 321 LTALPVIETQVNDVSAYIPTNVISITDGQIFLETELFYQGIRPAINIGLSVSRVGSAAQV 380
+T + + +D + + V I DG I L+ + +G PAIN+ SVSR+
Sbjct: 287 ITGIFTVLVDGDDHNEPVADAVRGILDGHIVLDRAIAERGRYPAINVLASVSRLAPRVWS 346
Query: 381 KAMKQVSGAVKGELAQYREM 400
+++ ++ LA+Y E
Sbjct: 347 PEERKLVRRLRALLARYEET 366