RPSBLAST alignment for GI: 254780617 and conserved domain: COG0056

>gnl|CDD|30405 COG0056, AtpA, F0F1-type ATP synthase, alpha subunit [Energy production and conversion]. Length = 504
 Score =  775 bits (2002), Expect = 0.0
 Identities = 334/509 (65%), Positives = 411/509 (80%), Gaps = 8/509 (1%)

Query: 1   MDIHAAEISDILRKRIKDFGNDSEFSEIGRVLSIGDGIARVYGLNNIRAGEMVQFSHGVY 60
           M ++  EIS +++++I++F  ++E  E+G V+S+GDGIARV GL N+ AGE+V+F  GV 
Sbjct: 1   MQLNPTEISSLIKQQIENFDVEAEVKEVGTVISVGDGIARVSGLENVMAGELVEFPGGVK 60

Query: 61  GMALNLEVDNVGVVILGSYKEISEGDIVKRTGRIVDVPVGLELLGRVVDALGNPIDGKGP 120
           GMALNLE D+VG VILG Y +I EGD VKRTGRI++VPVG ELLGRVVDALGNPIDGKGP
Sbjct: 61  GMALNLEEDSVGAVILGDYSDIKEGDEVKRTGRILEVPVGEELLGRVVDALGNPIDGKGP 120

Query: 121 IKCEQRSCTEADAPGIIQRQSVCEPLSTGIKAIDSLIPIGRGQRELIIGDRKTGKTSIIL 180
           I   +    E  APG++ R+SV EPL TGIKAID+LIPIGRGQRELIIGDR+TGKT+I +
Sbjct: 121 IDATKTRPVEKKAPGVMDRKSVNEPLQTGIKAIDALIPIGRGQRELIIGDRQTGKTAIAI 180

Query: 181 DTFLNQKSSHDKGSEKDKVYCIYVAIGQKRSSVARFVKALEDRGALSYSIVVVASASDPA 240
           DT +NQK S         V CIYVAIGQKRS+VA  V+ LE+ GA+ Y+IVV ASASD A
Sbjct: 181 DTIINQKGS--------GVKCIYVAIGQKRSTVANVVRTLEEHGAMDYTIVVAASASDSA 232

Query: 241 PMQLLAPFAGCAMGEYFRDNGYHALIAYDDLQKHAVAYRQLSLLLRRPPGREAYPGDVFY 300
           P+Q LAP+AGCAM EYFRDNG   LI YDDL KHAVAYR++SLLLRRPPGREAYPGDVFY
Sbjct: 233 PLQYLAPYAGCAMAEYFRDNGKDVLIVYDDLSKHAVAYREISLLLRRPPGREAYPGDVFY 292

Query: 301 LHSRLLERAAKMSDALGAGSLTALPVIETQVNDVSAYIPTNVISITDGQIFLETELFYQG 360
           LHSRLLERAAK+SD LG GS+TALP+IETQ  DVSAYIPTNVISITDGQIFLET+LF  G
Sbjct: 293 LHSRLLERAAKLSDELGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLETDLFNAG 352

Query: 361 IRPAINIGLSVSRVGSAAQVKAMKQVSGAVKGELAQYREMSSFSKFSSDLDSSTQKFLSK 420
           IRPAIN+GLSVSRVGSAAQ+KAMK+V+G+++  LAQYRE+ +FS+F SDLD +T+K L +
Sbjct: 353 IRPAINVGLSVSRVGSAAQIKAMKKVAGSLRLILAQYRELEAFSQFGSDLDKATRKQLER 412

Query: 421 GERLTELLKQPQFSPLAMEEQVVMIFAGISGCLDEVAVSQVRKFETNFLSHMRVSSQDIL 480
           G+RLTELLKQPQ+SPL++EEQV++++AG +G LD+V V +V  FE   L+++R   +++L
Sbjct: 413 GKRLTELLKQPQYSPLSVEEQVLILYAGTNGYLDDVPVEKVADFEKELLAYLRSDHKELL 472

Query: 481 EDIRKQKVLTDDIRSKLINEIKVFLEDFN 509
           E+IR  K L D+I +KL   IK F + F 
Sbjct: 473 EEIRTTKELDDEIEAKLKAAIKEFKKTFA 501