HHsearch alignment for GI: 254780618 and conserved domain: PRK13429
>PRK13429 F0F1 ATP synthase subunit delta; Provisional.
Probab=100.00 E-value=1.1e-41 Score=295.78 Aligned_cols=177 Identities=33% Similarity=0.514 Sum_probs=172.8
Q ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH
Q ss_conf 44555799999999998639989999999999999506998999851845220456578899862046643468999998
Q gi|254780618|r 8 FSDVPGRYSHSLFGVSNEEGVLDIVSDDISRLEALLMESADLRFFIHNPLFSMKDRRSVIDDLVKDAHFCAITANFLRIL 87 (186)
Q Consensus 8 ~~~ia~~YA~AL~~~a~e~~~l~~v~~~l~~i~~~~~~~~~l~~~l~sp~i~~~~K~~ii~~i~~~~~~~~~~~~fl~~L 87 (186)
T Consensus 3 ~~~ia~rYA~ALf~~a~e~~~l~~v~~~l~~l~~~~~~~~~l~~~l~~p~i~~~~K~~~i~~i~~~~~~~~~~~nfl~~L 82 (181)
T PRK13429 3 LNAIARRYAKALFQLAKEKGQVERVYEELKQLAALFETSPELRDALSNPVLSVEEKKAILEKLFGKLAVSPTLLNFLKLL 82 (181)
T ss_pred CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH
T ss_conf 63116999999999998759999999999999999967999999983889999999999999855688889999999999
Q ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHCCEEEEEEEECCCHHCEEEEEECCEEE
Q ss_conf 53320110142499999998887655533101056899899999999999974895899999974140238999799785
Q gi|254780618|r 88 VANGRLSVLPAIIKSFRAVCMYYRNEVMAFVRAFSGLSLLQQNKLGECLEKIVGKTVILDVMEDSALMGGFIVEIGAHQI 167 (186)
Q Consensus 88 ~~~~r~~~l~~I~~~f~~~~~~~~~~~~~~V~sa~~ls~~~~~~i~~~l~~~~~~~i~l~~~vD~slIGG~~i~vg~~~i 167 (186)
T Consensus 83 ~~~~r~~~l~~I~~~f~~~~~~~~~~~~v~V~tA~~Ls~~q~~~i~~~l~~~~~k~v~l~~~vD~sliGG~~i~vg~~vi 162 (181)
T PRK13429 83 ADRRRLGYLPAIAARYLELADEQRGIVRATVTSAVPLDEAQQEAIRQKLQKITGKKVELDTAVDPSLIGGVVVKIGDKVI 162 (181)
T ss_pred HHCCCHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHCCEEEEEECCEEE
T ss_conf 87797346999999999999986795999999806899999999999999873557205888880140727999999988
Q ss_pred EHHHHHHHHHHHHHHHH
Q ss_conf 02799999999998522
Q gi|254780618|r 168 DASLRTQLLKLGCILKE 184 (186)
Q Consensus 168 D~Si~~kL~~l~~~l~~ 184 (186)
T Consensus 163 D~Si~~kL~~lk~~Lkk 179 (181)
T PRK13429 163 DGSVATQLRRLKDSLKK 179 (181)
T ss_pred EHHHHHHHHHHHHHHHC
T ss_conf 66499999999999756