HHsearch alignment for GI: 254780618 and conserved domain: TIGR03321
>TIGR03321 alt_F1F0_F0_B alternate F1F0 ATPase, F0 subunit B. CC and in principle may run in either direction. This model represents the F0 subunit B of this apparent second ATP synthase.
Probab=98.89 E-value=3.1e-08 Score=74.92 Aligned_cols=71 Identities=20% Similarity=0.292 Sum_probs=66.6
Q ss_pred HHHHHHEEECCCCCHHHHHHHHHHHHHHHCCEEEEEEEECCCHHCEEEEEECCEEEEHHHHHHHHHHHHHH
Q ss_conf 55533101056899899999999999974895899999974140238999799785027999999999985
Q gi|254780618|r 112 NEVMAFVRAFSGLSLLQQNKLGECLEKIVGKTVILDVMEDSALMGGFIVEIGAHQIDASLRTQLLKLGCIL 182 (186)
Q Consensus 112 ~~~~~~V~sa~~ls~~~~~~i~~~l~~~~~~~i~l~~~vD~slIGG~~i~vg~~~iD~Si~~kL~~l~~~l 182 (186)
T Consensus 175 ~~~~v~v~sa~~L~~~~~~~i~~~l~~~lg~~~~l~F~~dp~Li~GieL~~gg~~i~Ws~~~yL~~le~~~ 245 (246)
T TIGR03321 175 SGNPVLVRSAFELPEEQREQIRDTIRETLGPEIRLRFQTEPDLIGGIELTAGGHKLAWSVDDYLESLEEDV 245 (246)
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEECCEEEECCHHHHHHHHHHHC
T ss_conf 89972885189999999999999999973888861464273400474887689533034999999997516