HHsearch alignment for GI: 254780618 and conserved domain: pfam02108

>pfam02108 FliH Flagellar assembly protein FliH.
Probab=90.21  E-value=0.7  Score=26.37  Aligned_cols=55  Identities=27%  Similarity=0.273  Sum_probs=42.1

Q ss_pred             CCCHHHHHHHHHHHHHHHCCEEEEEEEECCCH-HCEEEEEECCEEEEHHHHHHHHHH
Q ss_conf             89989999999999997489589999997414-023899979978502799999999
Q gi|254780618|r  123 GLSLLQQNKLGECLEKIVGKTVILDVMEDSAL-MGGFIVEIGAHQIDASLRTQLLKL  178 (186)
Q Consensus       123 ~ls~~~~~~i~~~l~~~~~~~i~l~~~vD~sl-IGG~~i~vg~~~iD~Si~~kL~~l  178 (186)
T Consensus        73 ~v~P~D~~~l~~~~~~~~-~~~~~~l~~D~~l~~Ggc~iet~~g~vDa~ietrl~~l  128 (128)
T pfam02108        73 RLNPDDLALVEEHLGDEL-KARGWRLVADPSLSRGGCRIESENGEIDATLETRWKAL  128 (128)
T ss_pred             EECHHHHHHHHHHHHHHH-CCCCEEEEECCCCCCCCEEEEECCCEEECCHHHHHHCC
T ss_conf             988999999999886422-22774898689878998899978963872799998609