HHsearch results for GI: 254780618 and protein with PDBid: 1abv_A

>1abv_A Delta subunit of the F1F0-ATP synthase; ATP synthesis, F1-ATPase, spectroscopy; NMR {Escherichia coli} SCOP: a.70.1.1 PDB: 2a7u_B
Probab=99.91  E-value=3.2e-24  Score=179.00  Aligned_cols=132  Identities=19%  Similarity=0.268  Sum_probs=123.1

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH
Q ss_conf             44555799999999998639989999999999999506998999851845220456578899862046643468999998
Q gi|254780618|r    8 FSDVPGRYSHSLFGVSNEEGVLDIVSDDISRLEALLMESADLRFFIHNPLFSMKDRRSVIDDLVKDAHFCAITANFLRIL   87 (186)
Q Consensus         8 ~~~ia~~YA~AL~~~a~e~~~l~~v~~~l~~i~~~~~~~~~l~~~l~sp~i~~~~K~~ii~~i~~~~~~~~~~~~fl~~L   87 (186)
                      +.+||+|||+|||++|.+.+.++.|.+++..+..++ ++|+|+.+|.+|.++.++|..++. .++ +++++.+.||+.+|
T Consensus         3 ~~tiAr~YA~ALf~~A~e~~~l~~~~~~l~~~~~l~-~~~~l~~~l~~p~~~~~~k~~l~~-~~~-~~~~~~~~nfl~lL   79 (134)
T 1abv_A            3 FITVARPYAKAAFDFAVEHQSVERWQDMLAFAAEVT-KNEQMAELLSGALAPETLAESFIA-VCG-EQLDENGQNLIRVM   79 (134)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-TSHHHHHHHTCSSCHHHHHHHHHH-HHC-SCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH-CCHHHHHHHHCCCCCHHHHHHHHH-HHH-HHHHHHHHHHHHHH
T ss_conf             126679999999999886299999999999999986-699999998701465999999999-862-12579999999999


Q ss_pred             HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHCC
Q ss_conf             5332011014249999999888765553310105689989999999999997489
Q gi|254780618|r   88 VANGRLSVLPAIIKSFRAVCMYYRNEVMAFVRAFSGLSLLQQNKLGECLEKIVGK  142 (186)
Q Consensus        88 ~~~~r~~~l~~I~~~f~~~~~~~~~~~~~~V~sa~~ls~~~~~~i~~~l~~~~~~  142 (186)
                      ++++|+.++++|+..|..++.+++|+..|+|+||.|||++|+++|++.|++++||
T Consensus        80 ~~~~R~~~l~~I~~~f~~l~~~~~~~~~a~V~sA~~Ls~~q~~~i~~~L~kk~gK  134 (134)
T 1abv_A           80 AENGRLNALPDVLEQFIHLRAVSEATAEVDVISAAALSEQQLAKISAAMEKRLSR  134 (134)
T ss_dssp             HHTTCGGGHHHHHHHHHHHHHHHHHC-----------------------------
T ss_pred             HHCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCC
T ss_conf             9833786799999999999999869158897669898999999999999988681