HHSEARCH alignment of GI: 254780618 and SCOP domain: d1abva_

Alignment
>d1abva_ a.70.1.1 (A:) N-terminal domain of the delta subunit of the F1F0-ATP synthase {Escherichia coli [TaxId: 562]}
Probab=99.75  E-value=1e-17  Score=134.54  Aligned_cols=103  Identities=16%  Similarity=0.256  Sum_probs=91.6

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH
Q ss_conf             44555799999999998639989999999999999506998999851845220456578899862046643468999998
Q gi|254780618|r    8 FSDVPGRYSHSLFGVSNEEGVLDIVSDDISRLEALLMESADLRFFIHNPLFSMKDRRSVIDDLVKDAHFCAITANFLRIL   87 (186)
Q Consensus         8 ~~~ia~~YA~AL~~~a~e~~~l~~v~~~l~~i~~~~~~~~~l~~~l~sp~i~~~~K~~ii~~i~~~~~~~~~~~~fl~~L   87 (186)
                      +++||+|||+|||++|.+++.++.|.+++..+..++ +++++..++.+|.++.++| ..+..+++ +++++.+.|||.+|
T Consensus         3 ~~TiArrYAkALf~lA~e~~~l~~~~~~l~~l~~l~-~~~~~~~~l~~p~~~~~kk-~~l~~~~~-~~~~~~~~nfl~lL   79 (105)
T d1abva_           3 FITVARPYAKAAFDFAVEHQSVERWQDMLAFAAEVT-KNEQMAELLSGALAPETLA-ESFIAVCG-EQLDENGQNLIRVM   79 (105)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-TSHHHHHHHTCSSCHHHHH-HHHHHHHC-SCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH-CCHHHHHHHHCCCCCHHHH-HHHHHHHH-CCCCHHHHHHHHHH
T ss_conf             246589999999999986197668999999999988-6998999876112849999-99999973-02589999999999


Q ss_pred             HHHHCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             53320110142499999998887655
Q gi|254780618|r   88 VANGRLSVLPAIIKSFRAVCMYYRNE  113 (186)
Q Consensus        88 ~~~~r~~~l~~I~~~f~~~~~~~~~~  113 (186)
                      ++++|+.++++|+..|..++++++|+
T Consensus        80 ~~~~Rl~~l~~I~~~f~~L~~~~e~T  105 (105)
T d1abva_          80 AENGRLNALPDVLEQFIHLRAVSEAT  105 (105)
T ss_dssp             HHTTCGGGHHHHHHHHHHHHHHHHHC
T ss_pred             HHCCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf             98864989999999999999977387


SCOP domain information

class: All alpha proteins
fold: ATPD N-terminal domain-like
superfamily: N-terminal domain of the delta subunit of the F1F0-ATP synthase
family: N-terminal domain of the delta subunit of the F1F0-ATP synthase
domain: N-terminal domain of the delta subunit of the F1F0-ATP synthase
species: Escherichia coli [TaxId: 562]