HHsearch alignment for GI: 254780619 and conserved domain: CHL00122
>CHL00122 secA preprotein translocase subunit SecA; Validated.
Probab=96.38 E-value=0.1 Score=32.24 Aligned_cols=92 Identities=22% Similarity=0.222 Sum_probs=66.2
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHH---HHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEE
Q ss_conf 75315799999999998514684799715210013---445554303897689962355723566789999719973999
Q gi|254780619|r 226 VTGSGKTEVYLEIVAAVLHLGKQVLILLPEISLTS---AILERFQKRFGVKPAEWHSSLSTSMREKIWRQVARGAISVIV 302 (731)
Q Consensus 226 vTGSGKTEVYl~li~~~L~~GkqvLiLvPEI~Lt~---Q~~~rl~~rF~~~v~v~HS~ls~~eR~~~w~~i~~G~~~IVI 302 (731)
T Consensus 97 ~TGEGKTL~atlp~ylnal~GkgvhvvTvNdYLA~RDae~m~~vy~~lGlsvg~i~~~~~~~er~~aY~------~DItY 170 (891)
T CHL00122 97 KTGEGKTLVATLPAYLNALTGKGVHIVTVNDYLARRDSEWMGQIYRFLGLSVGLIQEDMSIEERKQNYK------ADITY 170 (891)
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHC------CCCEE
T ss_conf 068857999999999997559972998064565686699999999982966702089999799999835------89279
Q ss_pred ECCHHH-H-------------HHHCCCEEEEEEEC
Q ss_conf 400121-1-------------00100013677405
Q gi|254780619|r 303 GVRSAL-F-------------LPFKKLGLIVIDEE 323 (731)
Q Consensus 303 GtRSAi-f-------------~P~~nLglIIvDEE 323 (731)
T Consensus 171 ~Tn~e~gFDyLRDnm~~~~~~~vqr~~~~aIvDEv 205 (891)
T CHL00122 171 VTNSELGFDYLRDNMALSLSEVVQRPFNYCIIDEV 205 (891)
T ss_pred ECCCCEECCCCCCCCCCCHHHHHCCCCCEEEEECH
T ss_conf 78876222566633236878840889973788640